<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body><div><div style="font-family: Calibri,sans-serif; font-size: 11pt;">Hello <br>Can you tell me the steps to install dipy from a release.<br>Steps to install modules like pywavelets nibabel and modules for adaptive denoising.<br>Thank you </div></div><div dir="ltr"><hr><span style="font-family: Calibri,sans-serif; font-size: 11pt; font-weight: bold;">From: </span><span style="font-family: Calibri,sans-serif; font-size: 11pt;"><a href="mailto:neuroimaging-request@python.org">neuroimaging-request@python.org</a></span><br><span style="font-family: Calibri,sans-serif; font-size: 11pt; font-weight: bold;">Sent: </span><span style="font-family: Calibri,sans-serif; font-size: 11pt;">05-06-2016 21:33</span><br><span style="font-family: Calibri,sans-serif; font-size: 11pt; font-weight: bold;">To: </span><span style="font-family: Calibri,sans-serif; font-size: 11pt;"><a href="mailto:neuroimaging@python.org">neuroimaging@python.org</a></span><br><span style="font-family: Calibri,sans-serif; font-size: 11pt; font-weight: bold;">Subject: </span><span style="font-family: Calibri,sans-serif; font-size: 11pt;">Neuroimaging Digest, Vol 13, Issue 5</span><br><br></div>Send Neuroimaging mailing list submissions to<br> neuroimaging@python.org<br><br>To subscribe or unsubscribe via the World Wide Web, visit<br> https://mail.python.org/mailman/listinfo/neuroimaging<br>or, via email, send a message with subject or body 'help' to<br> neuroimaging-request@python.org<br><br>You can reach the person managing the list at<br> neuroimaging-owner@python.org<br><br>When replying, please edit your Subject line so it is more specific<br>than "Re: Contents of Neuroimaging digest..."<br><br><br>Today's Topics:<br><br> 1. errors installing other modules in dipy (Vivek Joshi)<br> 2. Re: errors installing other modules in dipy (Ariel Rokem)<br><br><br>----------------------------------------------------------------------<br><br>Message: 1<br>Date: Sun, 5 Jun 2016 16:00:07 +0530<br>From: Vivek Joshi <vivekjoshi1894@gmail.com><br>To: neuroimaging@python.org<br>Subject: [Neuroimaging] errors installing other modules in dipy<br>Message-ID:<br> <CAMYkJfux-HKFhaf1aiCd9SZaE8+dHsTrwXr3ZRmyULw4=b=Eeg@mail.gmail.com><br>Content-Type: text/plain; charset="utf-8"<br><br>hello<br>I ve installed dipy using the instructions given in the dipy website. But<br>when trying to install other modules my setup.py got overwritten. Now i m<br>getting errors trying to fetch sherbrooke_3shell dataset.<br>Also i want to denoise the dataset using wavelet denoising. For that i need<br>to install other modules. How to do that?<br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://mail.python.org/pipermail/neuroimaging/attachments/20160605/66246150/attachment-0001.html><br><br>------------------------------<br><br>Message: 2<br>Date: Sun, 5 Jun 2016 08:51:50 -0700<br>From: Ariel Rokem <arokem@gmail.com><br>To: Neuroimaging analysis in Python <neuroimaging@python.org><br>Subject: Re: [Neuroimaging] errors installing other modules in dipy<br>Message-ID:<br> <CA+X4w0yQh7aVkXUV3BurMk-zM9cqk1JR78_GRh=eubC0RD6SHg@mail.gmail.com><br>Content-Type: text/plain; charset="utf-8"<br><br>Hi Vivek,<br><br>On Sun, Jun 5, 2016 at 3:30 AM, Vivek Joshi <vivekjoshi1894@gmail.com><br>wrote:<br><br>> hello<br>> I ve installed dipy using the instructions given in the dipy website. But<br>> when trying to install other modules my setup.py got overwritten. Now i m<br>> getting errors trying to fetch sherbrooke_3shell dataset.<br>><br><br>I am not exactly sure what you mean. Could you tell me exactly what you did<br>(step by step)? Which instructions did you follow? The ones to install from<br>the source code (<br>http://nipy.org/dipy/installation.html#installing-from-source)? Or for<br>installing a released version (I think that would be better in this case:<br>http://nipy.org/dipy/installation.html#installing-a-release)?<br><br><br>> Also i want to denoise the dataset using wavelet denoising. For that i<br>> need to install other modules. How to do that?<br>><br><br>Again - I am not exactly sure what you mean. Do you mean that you want to<br>install other libraries (e.g., pywavelets<br><http://www.pybytes.com/pywavelets/>)? You should be able to do that in<br>parallel to your Dipy installation.<br><br>Cheers,<br><br>Ariel<br><br><br><br>> _______________________________________________<br>> Neuroimaging mailing list<br>> Neuroimaging@python.org<br>> https://mail.python.org/mailman/listinfo/neuroimaging<br>><br>><br>-------------- next part --------------<br>An HTML attachment was scrubbed...<br>URL: <http://mail.python.org/pipermail/neuroimaging/attachments/20160605/3e4236d7/attachment-0001.html><br><br>------------------------------<br><br>Subject: Digest Footer<br><br>_______________________________________________<br>Neuroimaging mailing list<br>Neuroimaging@python.org<br>https://mail.python.org/mailman/listinfo/neuroimaging<br><br><br>------------------------------<br><br>End of Neuroimaging Digest, Vol 13, Issue 5<br>*******************************************<br></body></html>