<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; ">Hi,<div><br></div><div>I am really glad to get some responses so quickly.</div><div><br></div><div>Gael: I will follow up with Alexis - thats a great idea! </div><div><br></div><div>Ralf: I would still like to push the idea of having a separate scikit for this work. </div><div><br></div><div>What I would like the scikit to become is a collection of non-linear image registration algorithms, which is different to the warping that is described by the scikit image library. Particularly, I would also like the scikit to support the design and evaluation of registration algorithms . Actually, maybe it is better that the scikit is called scikit-register?</div><div><br></div><div>Something a bit different...</div><div><br></div><div>Does anyone else see some duplication between the scipy.ndimage and scikit.image? Seems like morphological operators are defined in both?</div><div><br></div><div>-N</div><div><br></div><div><div><div><div>On 14/05/2011, at 7:57 PM, Ralf Gommers wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"><br><br><div class="gmail_quote">On Sat, May 14, 2011 at 10:50 AM, Nathan Faggian <span dir="ltr"><<a href="mailto:nathan.faggian@gmail.com">nathan.faggian@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex;">
<div style="word-wrap:break-word">Greetings!<br>
<br>
I would like to start a project working on image registration algorithms
in python. I am proposing a new sci-kit called scikit-morph because I
believe registration is too specific for inclusion in scipy directly.<br></div></blockquote><div><br>Is there a reason not to include this in scikits.image instead? It fits well there, you'd probably get more help and you wouldn't have to worry about setting up a new project structure.<br>
<br>Cheers,<br>Ralf<br><br> <br></div><blockquote class="gmail_quote" style="margin: 0pt 0pt 0pt 0.8ex; border-left: 1px solid rgb(204, 204, 204); padding-left: 1ex;"><div style="word-wrap: break-word;">
<br>
My short term goals are to:<br>
<br>
1) implement a basic image registration framework - perhaps similar to the design used by ITK.<br>
2) Implement image resampling methods for use in the optimisation (c++).<br>
3) Use py.test to thoroughly test all code.<br>
<br>
I have started by setting up a github project, here:<br>
<br>
<a href="http://github.com/nfaggian/scikit-morph" target="_blank">http://github.com/nfaggian/scikit-morph</a><br>
<br>
How I can get this going in a way that meshes well with existing scikit
structures? I have looked at both the image and learn scikits, is it a
matter of simply using the same directory structures??<br>
<br>
Any help on getting a skeleton project going would be great - also very
open to people joining in - please email me directly if you would like to help out!<br>
<br>
Kind Regards,<br><font color="#888888">
<br>
Nathan Faggian</font></div><br>_______________________________________________<br>
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<br></blockquote></div><br>
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