Mailman 3 - DIPY - python.org

Become a member of the International Society for Tractography (IST)
by Maxime Descoteaux June 21, 2024

June 21, 2024

** *We are thrilled to officially announce the launch of the International Society for Tractography (IST) <http://www.tractography.io>. Our goal is to facilitate fundamental advances in the field of tractography that are only possible via an interactive community dedicated to sharing a broad range of talent and knowledge. This includes planning engaging events such as webinars, educational workshops, and conferences, as well as promoting large-scale collaborations across … [View More]

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weird tensor images, empty MD images
by madhura ingalhalikar May 23, 2024

May 23, 2024

Hi all, We face this issue commonly where the tensor image doesn't look as expected and the MD image is empty. For the same data, FSL creates perfect tensors and MD images. May I know if we are doing something wrong? data, affine = load_nifti(os.path.join(os.getcwd(), '_AXIAL_DTI_MDDW_20230421090830_32.nii')) bvals, bvecs = read_bvals_bvecs(os.path.join(os.getcwd(), '_AXIAL_DTI_MDDW_20230421090830_32.bval'), os.path.join(os.getcwd(), '_AXIAL_DTI_MDDW_20230421090830_32.bvec')) gtab = … [View More]

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Bundlewarp using field
by Ajay Kurani May 21, 2024

May 21, 2024

To whom it may concern, I recently saw a video regarding bundle warp and I had a few questions: 1) Are we able to use this on whole brain streamlines or only smaller bundles? 2) If we are only able to do smaller bundles, is there an MNI atlas you are currently using to warp to MNI space? If so are you just taken segment at a time and getting individual warp fields? 3)Are the deformations in a format that we can convert to be ANTS compatible for other applications (such as improving T1 … [View More]

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Open Meeting : live Q&A
by Serge K. April 1, 2024

April 1, 2024

Hello all, This is a friendly reminder that *today, At 1 pm EST*, we have our monthly open meeting. Today's meeting is a follow up of the workshop, live Q&A, open to everyone. If you have any questions or concerns, please feel free to connect online. The zoom link for this meeting is https://iu.zoom.us/j/84926066336 To plan future meeting, please add DIPY calendar in your calendar (h ttps://calendar.google.com/calendar/u/0?cid=dXY4YzUwZmtmdnM1Mjk4MzdrMjk4dWV… ) See you all online. On … [View More]

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How can I get all the recorded video of the workshop?
by wei zhang March 21, 2024

March 21, 2024

Dear Organizer of Dipy Workshop 2024: Sorry to disturb you. I have registered for platinum. How can I get all the recorded video of the workshop. Please tell me what I should do. Best wishes, Wei Zhang

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Access to the dipy lectures
by Rajan, Archith March 18, 2024

March 18, 2024

Hi Dipy team, I have updated my workshop registration to platinumds, and would like to have access to the lectures for all the 5 days. Thanks and Regards, Archith

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Re: DIPY Workshop Inquiry
by Eleftherios Garyfallidis March 14, 2024

March 14, 2024

Hi Brianca, There is one running this week. See https://workshop.dipy.org There is also a tutorial at ISBI 2024 and at OHBM 2024. Best, Elef On Wed, Mar 13, 2024 at 5:14 PM Renfro, Brianca C <bc.renfro(a)vumc.org> wrote: > Hello, > > > > I am writing to inquire about the DIPY Workshop that was held in April of > 2023. Will there be another workshop of this or any other kind coming up > this year? > > > > *Brianca Renfro* > > *Research Assistant* … [View More]

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DIPY Workshop Inquiry
by Renfro, Brianca C March 13, 2024

March 13, 2024

Hello, I am writing to inquire about the DIPY Workshop that was held in April of 2023. Will there be another workshop of this or any other kind coming up this year? Brianca Renfro Research Assistant Department of Psychiatry, Geriatric Center for Cognitive Medicine | Vanderbilt University Medical Center bc.renfro(a)vumc.org<mailto:bc.renfro@vumc.org>

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Dataset LowField MRI
by Alex Crimi March 13, 2024

March 13, 2024

Hi, I am planning some topics for students. I was looking for some available dataset on low-field MRI (<1T is already low-field for me) paired to something at least 3T. I have found nothing. This is interesting but it is not paired https://github.com/mylyu/M4Raw Interestingly there is this paper which uses existing datasets to improve their LF-MRI, but obviously they do not put their own LF-data publicly. https://www.sciencedirect.com/science/article/pii/S0730725X21002575 Do you know … [View More]

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Neuromatch Academy Applications are Open!
by Courtney Dean March 12, 2024

March 12, 2024

Hello, We're thrilled to announce our lineup of immersive courses at Neuromatch Academy! Whether you're a student eager to dive into cutting-edge topics or a seasoned researcher looking to contribute as a Teaching Assistant, we have opportunities tailored for you. 3-week Courses (July 8-26, 2024): <https://neuromatch.io/courses/> - Computational Neuroscience: Explore the intricacies of the brain's computational processes and join an engaging community of learners. - … [View More]

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