Greetings,
We're happy to announce new versions of Bed-Reader (1.0.0) and PySnpTools (0.5.11):
Bed-reader
The Python version of Bed-Reader now supports SciPy's sparse matrix format. Also, by default, it now depends only on NumPy. If you want that minimal version use
pip install bed-reader
If you want support for downloading example files and creating sparse matrices use:
pip install bed-reader[samples,sparse]
Rust version: The Rust version of Bed-Reader now returns a smaller "result …
[View More]code". (Result<_,Box<BedErrorPlus>> instead of Result<_, BedErrorPlus>.)
PySnpTools
We cleaned up the code, removing references to Python 2. Also, updated some sample files to fix warnings that they were compressed with Python 2 methods.
* Carl
Carl Kadie, Ph.D.
FaST-LMM & PySnpTools Team<https://fastlmm.github.io/>
(Microsoft Research, retired)
https://www.linkedin.com/in/carlk/
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