Hi,I run : python setup.py build and got: building library "npymath" sourcescustomize GnuFCompilerCould not locate executable g77Could not locate executable f77customize IntelFCompilerCould not locate executable ifortCould not locate executable ifccustomize LaheyFCompilerCould not locate executable lf95customize PGroupFCompilerCould not locate executable pgf90Could not locate executable pgf77customize AbsoftFCompilerCould not locate executable f90customize NAGFCompilerFound executable /usr/bin/f95customize VastFCompilercustomize CompaqFCompilerCould not locate executable fortcustomize IntelItaniumFCompilerCould not locate executable efortCould not locate executable efccustomize IntelEM64TFCompilercustomize Gnu95FCompilerFound executable /usr/bin/gfortrancustomize Gnu95FCompilercustomize Gnu95FCompiler using configC compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC......... building extension "numpy.random.mtrand" sourcesC compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/python272/include/python2.7 -c'gcc: _configtest.cgcc -pthread _configtest.o -o _configtest_configtestfailure. then : python setup.py install --prefix=/mypath/numpy I got: Running from numpy source directory.non-existing path in 'numpy/distutils': 'site.cfg'F2PY Version 2blas_opt_info:blas_mkl_info: libraries mkl,vml,guide not found in /mypath/python272/lib libraries mkl,vml,guide not found in /usr/local/lib64 libraries mkl,vml,guide not found in /usr/local/lib libraries mkl,vml,guide not found in /usr/lib64 libraries mkl,vml,guide not found in /usr/lib NOT AVAILABLE atlas_blas_threads_info:Setting PTATLAS=ATLAS libraries ptf77blas,ptcblas,atlas not found in / mypath/python272/lib libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib64 libraries ptf77blas,ptcblas,atlas not found in /usr/local/lib libraries ptf77blas,ptcblas,atlas not found in /usr/lib64/sse2 libraries ptf77blas,ptcblas,atlas not found in /usr/lib64 libraries ptf77blas,ptcblas,atlas not found in /usr/lib/sse2 libraries ptf77blas,ptcblas,atlas not found in /usr/lib NOT AVAILABLE atlas_blas_info: libraries f77blas,cblas,atlas not found in /mypath/python272/lib libraries f77blas,cblas,atlas not found in /usr/local/lib64 libraries f77blas,cblas,atlas not found in /usr/local/lib libraries f77blas,cblas,atlas not found in /usr/lib64/sse2 libraries f77blas,cblas,atlas not found in /usr/lib64 libraries f77blas,cblas,atlas not found in /usr/lib/sse2 libraries f77blas,cblas,atlas not found in /usr/lib NOT AVAILABLE UserWarning: Lapack (http://www.netlib.org/lapack/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [lapack]) or by setting the LAPACK environment variable. warnings.warn(LapackNotFoundError.__doc__)lapack_src_info: NOT AVAILABLE Lapack (http://www.netlib.org/lapack/) sources not found. Directories to search for the sources can be specified in the numpy/distutils/site.cfg file (section [lapack_src]) or by setting the LAPACK_SRC environment variable. warnings.warn(LapackSrcNotFoundError.__doc__) NOT AVAILABLE running installrunning buildrunning config_ccunifing config_cc, config, build_clib, build_ext, build commands --compiler optionsrunning config_fcunifing config_fc, config, build_clib, build_ext, build commands --fcompiler optionsrunning build_srcbuild_srcbuilding py_modules sourcesbuilding library "npymath" sourcescustomize GnuFCompilerCould not locate executable g77Could not locate executable f77customize IntelFCompilerCould not locate executable ifortCould not locate executable ifccustomize LaheyFCompilerCould not locate executable lf95customize PGroupFCompilerCould not locate executable pgf90Could not locate executable pgf77customize AbsoftFCompilerCould not locate executable f90customize NAGFCompilerFound executable /usr/bin/f95customize VastFCompilercustomize CompaqFCompilerCould not locate executable fortcustomize IntelItaniumFCompilerCould not locate executable efortCould not locate executable efccustomize IntelEM64TFCompilercustomize Gnu95FCompilerFound executable /usr/bin/gfortrancustomize Gnu95FCompilercustomize Gnu95FCompiler using configC compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/remote/dcnl/Ding/backup_20100716/python272/include/python2.7 -c'gcc: _configtest.cgcc -pthread _configtest.o -o _configtestsuccess!removing: _configtest.c _configtest.o _configtestC compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC ........................ compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/mypath/python272/include/python2.7 -c'gcc: _configtest.cgcc -pthread _configtest.o -o _configtest_configtestfailure. at the end: running install_egg_infoRemoving /mypath/numpy/lib/python2.7/site-packages/numpy-1.6.1-py2.7.egg-infoWriting /mypath/numpy/lib/python2.7/site-packages/numpy-1.6.1-py2.7.egg-inforunning install_clib Then I got: pythonPython 2.7.2 (default, Dec 20 2011, 12:32:10)[GCC 4.1.2 20080704 (Red Hat 4.1.2-51)] on linux2Type "help", "copyright", "credits" or "license" for more information.
import numpyTraceback (most recent call last): File "<stdin>", line 1, in <module>ImportError: No module named numpy
I have updated PATH for bin and lib of numpy. I have got f2py and lib files : add_newdocs.py distutils __init__.py numarray testingadd_newdocs.pyc doc __init__.pyc oldnumeric testscompat dual.py lib polynomial version.py__config__.py dual.pyc linalg random version.pyc__config__.pyc f2py ma setup.pycore fft matlib.py setup.pycctypeslib.py _import_tools.py matlib.pyc setupscons.pyctypeslib.pyc _import_tools.pyc matrixlib setupscons.pyc Any help is really appreciated. thanks
From: derek@astro.physik.uni-goettingen.de Date: Tue, 20 Dec 2011 20:43:53 +0100 To: numpy-discussion@scipy.org Subject: Re: [Numpy-discussion] numpy1.6.1 install fortran compiler error
Hi Jack,
In order to install scipy, I am trying to install numpy 1.6.1. on GNU/linux redhat 2.6.18.
But, I got error about fortran compiler.
I have gfortran. I do not have f77/f90/g77/g90.
that's good!
I run : python setup.py build --fcompiler=gfortran
It woks well and tells me that
customize Gnu95FCompiler Found executable /usr/bin/gfortran
But, i run:
building library "npymath" sources customize GnuFCompiler Could not locate executable g77 Could not locate executable f77 customize IntelFCompiler Could not locate executable ifort Could not locate executable ifc customize LaheyFCompiler Could not locate executable lf95 customize PGroupFCompiler Could not locate executable pgf90 Could not locate executable pgf77 customize AbsoftFCompiler Could not locate executable f90 customize NAGFCompiler Found executable /usr/bin/f95 customize Gnu95FCompiler customize Gnu95FCompiler using config C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
Do I have to install f77/f90/g77/g90 ?
You did not send any actual error message here, so it's difficult to tell where exactly your install failed. But gfortran is preferred over f77 etc. and should in fact be automatically selected (without the '--fcompiler=gfortran'), it is apparently also found in the right place. Could you send us the last lines of output with the error itself, or possibly everything following a line starting with "Traceback:.." ; and also the output of `gfortran -v`?
Cheers, Derek
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