I have a N-dimensional array A and I want to operate in one of the axis (k)
with a 1 dimensional array (for instance, subtracting an array B of length
k). I have looked for some solutions in the manual and did not found any.
I am not sure that I understand your problem exactly, but here's the solution
to what I think your problem is ;-)
from Scientific.indexing import index_expression
import Numeric
indices = index_expression[::] + \
(len(A.shape)-k-1)*index_expression[Numeric.NewAxis]
result = A-B[indices]
This uses a module from ScientificPython which provides syntactic sugar
for indexing. In fact, the module is so simple that I include it here:
---------------------------------------------------------------------------
# A nicer way to build up index tuples for arrays.
#
# You can do all this with slice() plus a few special objects,
# but there's a lot to remember. This version is simpler because
# it uses the standard array indexing syntax.
#
# Written by Konrad Hinsen
# last revision: 1999-7-23
#
"""This module provides a convenient method for constructing
array indices algorithmically. It provides one importable object,
'index_expression'.
For any index combination, including slicing and axis insertion,
'a[indices]' is the same as 'a[index_expression[indices]]' for any
array 'a'. However, 'index_expression[indices]' can be used anywhere
in Python code and returns a tuple of indexing objects that can be
used in the construction of complex index expressions.
Sole restriction: Slices must be specified in the double-colon
form, i.e. a[::] is allowed, whereas a[:] is not.
"""
class _index_expression_class:
import sys
maxint = sys.maxint
def __getitem__(self, item):
if type(item) != type(()):
return (item,)
else:
return item
def __len__(self):
return self.maxint
def __getslice__(self, start, stop):
if stop == self.maxint:
stop = None
return self[start:stop:None]
index_expression = _index_expression_class()
---------------------------------------------------------------------------
Konrad.
--
-------------------------------------------------------------------------------
Konrad Hinsen | E-Mail: hinsen@cnrs-orleans.fr
Centre de Biophysique Moleculaire (CNRS) | Tel.: +33-2.38.25.56.24
Rue Charles Sadron | Fax: +33-2.38.63.15.17
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-------------------------------------------------------------------------------
