unsuccessful install on 64bit machine
While installing numpy under a non-conventional directory: *python setup.py install --prefix==/gpfs1/active/jose/code/python *I get two classes of warnings: (1) blas_mkl_info: /tmp/numpy-0.9.5/numpy/distutils/system_info.py:531: UserWarning: Library error: libs=['mkl', 'vml', 'guide'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ NOT AVAILABLE (and others warnings similar to this) (2)numpy.core - nothing done with h_files= ['build/src/numpy/core/src/scalartypes.inc', 'build/src/numpy/core/src/arraytypes.inc', 'build/src/numpy/core/config.h', 'build/src/numpy/core/__multiarray_api.h'] (and others warnings similar to this) I created a very simple site.cfg file under numpy/distutils, which goes like this [blas] library_dirs = /usr/lib64 [lapack] library_dirs = /usr/lib64 I have no Atlas library installed in the system. My compiler: gcc version 3.4.4 20050721 (Red Hat 3.4.4-2) (I also have pg compilers) After setup.py has run, I have no */gpfs1/active/jose/code/python/lib64/python2.3/site-packages/numpy *created. So numpy is not installed. Any ideas, please? -- Jose M. Borreguero jmborr@gatech.edu, www.borreguero.com phone: 404 407 8980 Fax: 404 385 7478 Center for the Study of Systems Biology, School of Biology, Georgia Institute of Technology, 250 14St NW, Atlanta GA 30318
On Fri, 24 Feb 2006, Jose Borreguero wrote:
While installing numpy under a non-conventional directory: *python setup.py install --prefix==/gpfs1/active/jose/code/python *I get two classes of warnings:
(1) blas_mkl_info: /tmp/numpy-0.9.5/numpy/distutils/system_info.py:531: UserWarning: Library error: libs=['mkl', 'vml', 'guide'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ NOT AVAILABLE (and others warnings similar to this)
(2)numpy.core - nothing done with h_files= ['build/src/numpy/core/src/scalartypes.inc', 'build/src/numpy/core/src/arraytypes.inc', 'build/src/numpy/core/config.h', 'build/src/numpy/core/__multiarray_api.h'] (and others warnings similar to this)
This warnings can be ignored.
I created a very simple site.cfg file under numpy/distutils, which goes like this [blas] library_dirs = /usr/lib64 [lapack] library_dirs = /usr/lib64
To avoid such hooks and all the troubles on 64-bit platforms, numpy/distutils/system_info.py needs a 64-bit support in setting up default_* directory lists. I can write the patch if someone could provide information how to determine if one is running 64-bit or 32-bit applications. numpy.distutils.cpuinfo can give is_64bit()->True but that does not guarantee that used software is 64-bit. What are the values of sys.platform os.name in your system?
I have no Atlas library installed in the system. My compiler: gcc version 3.4.4 20050721 (Red Hat 3.4.4-2) (I also have pg compilers)
After setup.py has run, I have no */gpfs1/active/jose/code/python/lib64/python2.3/site-packages/numpy *created. So numpy is not installed.
What was the output when you run setup.py? Pearu
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Jose Borreguero -
Pearu Peterson