Hi all. I'm trying to build Python 2.7.5 on a GNU/Linux (Linux Mint 14) system, but using a different sysroot (that is, a separate <d>/usr/include, <d>/usr/lib, etc., not the real one for my system). I have shell script wrappers around GCC and its various tools that invoke it with the right paths to force this to happen, and when I call Python's configure I send along "CC=sysroot-gcc", etc. for all the various tools. Note that it's not really a cross-compilation because the target is also a GNU/Linux system on the same hardware architecture. The majority of Python builds just fine like this. However, I'm having serious problems building modules such as fcntl, etc. Looking at the output from the makefile, I can see that somehow, someone is forcibly adding "-I/usr/include/x86_64-linux-gnu" to the link line: building 'termios' extension sysroot-gcc -pthread -fPIC -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I. -IInclude -I/usr/include/x86_64-linux-gnu -I/common/sysroot/tools/usr/include -I/common/sysroot/tools/usr/include-fixed -I/usr/local/include -I/home/workspaces/psmith/python/obj/src/Python-2.7.5/Include -I/home/workspaces/psmith/python/obj/bld/python -c /home/workspaces/psmith/python/obj/src/Python-2.7.5/Modules/termios.c -o build/temp.linux-x86_64-2.7/home/workspaces/psmith/python/obj/src/Python-2.7.5/Modules/termios.o This fails miserably because the headers in /usr/include/x86_64-linux-gnu do not play at all nicely with my other sysroot headers. Ditto for other extensions like fcntl, etc. I've searched high and low in the Python source, generated makefiles, config.log, etc. and I cannot find where this -I flag is coming from anywhere. I found the --oldincludedir flag to configure and set it to point into my sysroot as well, but that didn't help: the /usr/include still appears when building these extensions. Can anyone tell me where Python is getting these -I flags and what I need to do to tell it to NOT use those flags when building extensions? I'd also like to remove the -I/usr/local/include, although this is not actually causing me problems right now.