scipy.ndimage.interpolation.map_coordinates (http://docs.scipy.org/doc/scipy/reference/generated/scipy.ndimage.interpolation.map_coordinates.html) + matplotlib will do what you want.

Tom


On Thu, Sep 12, 2013 at 11:19 AM, Dan <dkin@walla.co.il> wrote:
Hi,

Is there a way to generate an intensity plot of along the line using scikit-image (like Plot Profile option in imageJ) (example: http://imagej.1557.x6.nabble.com/file/n3682337/cracks.png).

Thanks.

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Thomas A Caswell
PhD Candidate University of Chicago
Nagel and Gardel labs
tcaswell@uchicago.edu
jfi.uchicago.edu/~tcaswell
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