scipy.ndimage.interpolation.map_coordinates ( + matplotlib will do what you want.


On Thu, Sep 12, 2013 at 11:19 AM, Dan <> wrote:

Is there a way to generate an intensity plot of along the line using scikit-image (like Plot Profile option in imageJ) (example:


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Thomas A Caswell
PhD Candidate University of Chicago
Nagel and Gardel labs
o: 773.702.7204