Alright, I'll come back to this a little later. First, clean the documentation and submit for a PR.

Also on another note, is there a function for checking the connectivity of objects in an image ? How about multiple objects ?I'm sure this will be there, but just not sure which function it is. And in case there isn't, is there a better way of finding an initial point in the object that maybe :

#im is a binary image

(m, n) = im.shape

for i=0:m-1
for j=0:n-1
if im(i,j)
# this is my starting point

Thanks,

Chintak

On Sun, Apr 21, 2013 at 12:06 AM, Tony Yu <tsyu80@gmail.com> wrote:

On Sat, Apr 20, 2013 at 1:28 PM, Chintak Sheth <chintaksheth@gmail.com> wrote:

Hi Tony,

On Sat, Apr 20, 2013 at 10:18 PM, Tony Yu <tsyu80@gmail.com> wrote:

This is kind of a shot in the dark: Could you try running nosetests in the segmentation subpackage of skimage?

Strangely so, "nosetests -v" runs in segmentation subpackage. However, it gives me a warning :

warnings.warn('SciPy was built without UMFPACK. Consider rebuilding '

Does that give any more ideas ?

I was hoping that the umfpack import was broken, but it looks like it's failing gracefully.

I don't have any specific ideas. Could you try going into each subpackage and running nosetests in each? This is a bit brute-force, but there's not a lot of information to go on right now.

-Tony

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