Hi Ron, and welcome to the community! 😊
scikit-image contains many functions for image processing and analysis; probably not as many as Fiji, but enough for the most common things and to get you started!
To use scikit-image you have to program in Python, which is a different language from ImageJ macros. (Even ImageJ Python scripts are actually Jython, which is based on an old version of Python — there are many similarities but many differences, and the biggest one is that you cannot easily access the ImageJ and Fiji functions from Python.)
Our documentation starts here:
The list of all available functions is here:
and the gallery of examples, which shows you by example how to perform many common image analysis operations, is here:
We also have a getting started guide here:
I'll also point you to a project that you might find useful, PyImageJ, which lets you call ImageJ functionality from Python. It's a little trickier to install and use, though.
For all of this you can get help on image.sc, so feel free to keep asking usage questions there!
Juan.
On Sun, 21 Feb 2021, at 5:01 AM, Ron DeSpain wrote:
I'm a veteran ImageJ/FIJI coder, and I'm transitioning to python.
is scikit-image an incorporation of ImageJ into python?
Can I run my ImageJ macros within scikit-image package?
What's the URL for the scikit-image function descriptions?
Thanks
Ron DeSpain
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