Hi all, I'm currently working with cell nuclei segmentation (in 3D) with fluorescence imagery. I'm know using quite a pannel of sckimage routines to segment those out (local contrast enhancement, threshold otsu, etc.)?. Would you be interested if I turned that into an example (maybe something that could be chunked in several pieces?). Best, Guillaume On 20/11/2013 07:13, Stéfan van der Walt wrote:

On 20 Nov 2013 07:33, "Juan Nunez-Iglesias" <jni.soma@gmail.com <mailto:jni.soma@gmail.com>> wrote:

...

I'm guessing you are applying label() directly to your image, which

is not the right way to use it.

Looks like isolating objects is a common problem. Time for another gallery example? We already have the coins, but perhaps something more realistic with some biological data.

Stéfan

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