Hi Guys,
I'm trying to subsample the points returned by circle_perimeter and I'm having trouble. Since the points are calculated in octants (and reflected?) it makes walking it somewhat confusing (see below) Does anyone know off hand how I could walk this thing clockwise for example (or produce a sensible subsample of e.g., every other point or every 4th point, etc).
To be a little more concrete:
from skimage.draw import circle_perimeter
rr, cc = circle_perimeter(12, 12, 10) im = zeros((40,40)) im[rr[::4],cc[::4]] = 1 imshow(im, cmap=cm.gray) # returns one quadrant of the circle
Still Googling, but I'd appreciate any help =)
Thanks, Dan
This should do the trick…
import numpy as np import pylab from skimage.draw import circle_perimeter
img = np.zeros((41, 41)) rr, cc = circle_perimeter(20, 20, 18)
SKIP_SIZE = 3
img[rr, cc] = 5
for i in range(4): rri = rr[i::4] cci = cc[i::4] rri_sorted = np.argsort(rri) rri = rri[rri_sorted] cci = cci[rri_sorted] cci_sorted = np.argsort(cci) rri = rri[cci_sorted] cci = cci[cci_sorted] img[rri[::SKIP_SIZE], cci[::SKIP_SIZE]] = 1
pylab.imshow(img, interpolation='nearest') pylab.show()
Johannes Schönberger
Am 28.05.2013 um 18:43 schrieb Dan Farmer dfarmernv@gmail.com:
Hi Guys,
I'm trying to subsample the points returned by circle_perimeter and I'm having trouble. Since the points are calculated in octants (and reflected?) it makes walking it somewhat confusing (see below) Does anyone know off hand how I could walk this thing clockwise for example (or produce a sensible subsample of e.g., every other point or every 4th point, etc).
To be a little more concrete:
from skimage.draw import circle_perimeter
rr, cc = circle_perimeter(12, 12, 10) im = zeros((40,40)) im[rr[::4],cc[::4]] = 1 imshow(im, cmap=cm.gray) # returns one quadrant of the circle
Still Googling, but I'd appreciate any help =)
Thanks, Dan
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A much better way came to my mind:
import numpy as np import pylab from skimage.draw import circle_perimeter
img = np.zeros((41, 41)) center_r = center_c = 20 rr, cc = circle_perimeter(center_r, center_c, 18)
t = np.arctan2(rr  center_r, cc  center_c) t_sorted = np.argsort(t) rr = rr[t_sorted] cc = cc[t_sorted]
img[rr[::4], cc[::4]] = 1
pylab.imshow(img, interpolation='nearest') pylab.show()
Johannes Schönberger
Am 28.05.2013 um 22:40 schrieb Johannes Schönberger jschoenberger@demuc.de:
This should do the trick…
import numpy as np import pylab from skimage.draw import circle_perimeter
img = np.zeros((41, 41)) rr, cc = circle_perimeter(20, 20, 18)
SKIP_SIZE = 3
img[rr, cc] = 5
for i in range(4): rri = rr[i::4] cci = cc[i::4] rri_sorted = np.argsort(rri) rri = rri[rri_sorted] cci = cci[rri_sorted] cci_sorted = np.argsort(cci) rri = rri[cci_sorted] cci = cci[cci_sorted] img[rri[::SKIP_SIZE], cci[::SKIP_SIZE]] = 1
pylab.imshow(img, interpolation='nearest') pylab.show()
Johannes Schönberger
Am 28.05.2013 um 18:43 schrieb Dan Farmer dfarmernv@gmail.com:
Hi Guys,
I'm trying to subsample the points returned by circle_perimeter and I'm having trouble. Since the points are calculated in octants (and reflected?) it makes walking it somewhat confusing (see below) Does anyone know off hand how I could walk this thing clockwise for example (or produce a sensible subsample of e.g., every other point or every 4th point, etc).
To be a little more concrete:
from skimage.draw import circle_perimeter
rr, cc = circle_perimeter(12, 12, 10) im = zeros((40,40)) im[rr[::4],cc[::4]] = 1 imshow(im, cmap=cm.gray) # returns one quadrant of the circle
Still Googling, but I'd appreciate any help =)
Thanks, Dan
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 You received this message because you are subscribed to the Google Groups "scikitimage" group. To unsubscribe from this group and stop receiving emails from it, send an email to scikitimage+unsubscribe@googlegroups.com. For more options, visit https://groups.google.com/groups/opt_out.
participants (2)

Dan Farmer

Johannes Schönberger