Re: Errors while compiling and $make coverage
Hi, It seems you do not have all the necessary files. Look at the top, where the Cython compilation takes place and the output is: non-existing path in 'skimage/morphology': '_convex_hull.c' Try to make a new, clean clone of the repository and recompile. I also recommend you to use virtualenv(-wrapper) to install packages. Johannes Schönberger Am 15.04.2013 um 02:52 schrieb Ankit Agrawal <aaaagrawal@gmail.com>:
Hi everyone,
I am having some issues with compilation. This is what I did.
1. cloned the repo from github. 2. for installation : $ sudo python setup.py install
this generates the following log : http://pastebin.com/WnAtinFK
I also noticed that the .pyc and .c files that got generated had only read-only access.
To test further, I did
3. $ make coverage
which generated this log : http://pastebin.com/LySbvnPG , probably because it could not access the .c files. Can anybody help me out by pointing if I am doing something wrong? Thank you.
Regards, Ankit Agrawal.
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Hi Johannes, Thank you for your reply. I made a new clone and compiled it. As compared to my previous log <http://pastebin.com/WnAtinFK>, this time<http://pastebin.com/xZ42xi61>too I got non-existing path error but only once(previously I got two). Any idea on what might be causing this? Both the times, I also get these two lines 1. warning: no files found matching 'setup.cfg' 2. no previously-included directories found matching 'doc/build' Any solution? Thank you for your help. Regards, Ankit.
Hi Ankit, Just couple of things, are cython and numpy updated to the latest version ? I was unable to import skimage in iPython in spite of being able to import it in Python shell, since my iPython was linked to 2.7.2 (default version). Then maybe you can check the file directory of the cloned repo to ensure you didn't miss out on any warnings or errors there. Compare it the repo on git as Johannes pointed out. Hope it helps. Let us know how it goes. Chintak On Mon, Apr 15, 2013 at 4:09 PM, Ankit Agrawal <aaaagrawal@gmail.com> wrote:
Hi Johannes,
Thank you for your reply. I made a new clone and compiled it. As compared to my previous log <http://pastebin.com/WnAtinFK>, this time<http://pastebin.com/xZ42xi61>too I got non-existing path error but only once(previously I got two). Any idea on what might be causing this? Both the times, I also get these two lines
1. warning: no files found matching 'setup.cfg' 2. no previously-included directories found matching 'doc/build'
Any solution? Thank you for your help.
Regards, Ankit.
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participants (3)
-
Ankit Agrawal -
Chintak Sheth -
Johannes Schönberger