Mailman 3 January 2018 - Scikit-learn-commits

[scikit-learn/scikit-learn] bfc4cf: DOC: fix formatting issue
by GitHub Jan. 22, 2018

Jan. 22, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: bfc4cf7d69881198c7dd5f22314465228f3c05ee https://github.com/scikit-learn/scikit-learn/commit/bfc4cf7d69881198c7dd5f2… Author: Gael Varoquaux <gael.varoquaux(a)normalesup.org> Date: 2018-01-22 (Mon, 22 Jan 2018) Changed paths: M doc/modules/clustering.rst Log Message: ----------- DOC: fix formatting issue

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[scikit-learn/scikit-learn] 823382: [MRG+2] Single linkage clustering (#9372)
by GitHub Jan. 22, 2018

Jan. 22, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 823382995c046d98a4d892fff1f564c0f04ba340 https://github.com/scikit-learn/scikit-learn/commit/823382995c046d98a4d892f… Author: Leland McInnes <leland.mcinnes(a)gmail.com> Date: 2018-01-22 (Mon, 22 Jan 2018) Changed paths: M doc/modules/clustering.rst M doc/whats_new/v0.20.rst M examples/cluster/plot_agglomerative_clustering.py M examples/cluster/plot_digits_linkage.py A examples/cluster/plot_linkage_comparison.py M sklearn/cluster/_hierarchical.pyx M sklearn/cluster/hierarchical.py M sklearn/cluster/tests/test_hierarchical.py Log Message: ----------- [MRG+2] Single linkage clustering (#9372) * First cut at basic single linkage internals * Refer to correct dist_metrics package * Add csgraph sparse implementation for single linkage * Add fast labelling/conversion from MST to single linkage tree; remove uneeded single_linkage.pyx file. * Ensure existing tests cover single linkage * Iterating toward correct solution. Still have to get n_clusters, compute_full_tree=False working * Fix the parents array when we don't get the "full tree" * Add single linkage to agglomerative clustering example. * Add single linkage to digits agglomerative clustering example. * Update documentation to reflect the addition of single linkage. * Update documentation to reflect the addition of single linkage. * Provide a more complete comparison of the different linkage methods, highlighting the relative strengths and weaknesses. * Update docs with a more complete comparison on linkage methods (scale to be determined?) * Update WhatsNew for single linkage clustering. * Handle true zero distances by setting them to "epsilon" distances * Add test for identical points messing with sparse linkage clustering. * Test all the linkage methods for identical point issues * Cast precomputed distances to float64 for consistency * Turn bounds checking off; add docsting warning. * Make public and private versions of labelling. * more efficient is sorted check * Explicit cast to cover all bases

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[scikit-learn/scikit-learn] 1879a5: [MRG+1] Missing import in semi supervised learning...
by GitHub Jan. 21, 2018

Jan. 21, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 1879a50ba23cba4f342e591b3ffb58d476e0bd98 https://github.com/scikit-learn/scikit-learn/commit/1879a50ba23cba4f342e591… Author: Akash Shivram <syashakash(a)users.noreply.github.com> Date: 2018-01-21 (Sun, 21 Jan 2018) Changed paths: M sklearn/semi_supervised/label_propagation.py Log Message: ----------- [MRG+1] Missing import in semi supervised learning label propagation example (#10496)

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[scikit-learn/scikit-learn] c753b7: DOC mention default base_estimator of AdaBoost (#1...
by GitHub Jan. 19, 2018

Jan. 19, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: c753b77ac49e72ebc0fe5e3c2369fe628f975017 https://github.com/scikit-learn/scikit-learn/commit/c753b77ac49e72ebc0fe5e3… Author: Ayush Gupta <ayushgup(a)iitk.ac.in> Date: 2018-01-19 (Fri, 19 Jan 2018) Changed paths: M sklearn/ensemble/weight_boosting.py Log Message: ----------- DOC mention default base_estimator of AdaBoost (#10501)

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[scikit-learn/scikit-learn] 96dd33: Remove deprecated imread/imresize from docs and ex...
by GitHub Jan. 19, 2018

Jan. 19, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 96dd337ae073652ed4d77d331b285e67629c519d https://github.com/scikit-learn/scikit-learn/commit/96dd337ae073652ed4d77d3… Author: jotasi <siebertjonathan(a)aim.com> Date: 2018-01-19 (Fri, 19 Jan 2018) Changed paths: M doc/datasets/index.rst M examples/cluster/plot_face_segmentation.py M examples/cluster/plot_face_ward_segmentation.py Log Message: ----------- Remove deprecated imread/imresize from docs and examples (#10502)

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[scikit-learn/scikit-learn] 2afcc3: Fix propagation of observation error to GP model (...
by GitHub Jan. 18, 2018

Jan. 18, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 2afcc3692633dc80dc5454dd0eef3ae077b4c4cf https://github.com/scikit-learn/scikit-learn/commit/2afcc3692633dc80dc5454d… Author: David Kirkby <dkirkby(a)uci.edu> Date: 2018-01-18 (Thu, 18 Jan 2018) Changed paths: M examples/gaussian_process/plot_gpr_noisy_targets.py Log Message: ----------- Fix propagation of observation error to GP model (#10026)

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[scikit-learn/scikit-learn] afe540: Add deprecated scipy image-related functions in ex...
by GitHub Jan. 18, 2018

Jan. 18, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: afe540c7f2cbad259dd333e6744b088213180bee https://github.com/scikit-learn/scikit-learn/commit/afe540c7f2cbad259dd333e… Author: jotasi <siebertjonathan(a)aim.com> Date: 2018-01-18 (Thu, 18 Jan 2018) Changed paths: M .travis.yml M build_tools/appveyor/requirements.txt M build_tools/travis/install.sh M sklearn/datasets/base.py M sklearn/datasets/lfw.py M sklearn/datasets/tests/test_base.py M sklearn/datasets/tests/test_lfw.py A sklearn/externals/_pilutil.py Log Message: ----------- Add deprecated scipy image-related functions in externals._pilutil (#10427)

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[scikit-learn/scikit-learn] 4c99cd: [MRG+1] MAINT dissociate nan and inf in check_arra...
by GitHub Jan. 18, 2018

Jan. 18, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 4c99cd4aa292034a54580b670573c27f8da85404 https://github.com/scikit-learn/scikit-learn/commit/4c99cd4aa292034a54580b6… Author: Guillaume Lemaitre <g.lemaitre58(a)gmail.com> Date: 2018-01-18 (Thu, 18 Jan 2018) Changed paths: M sklearn/utils/tests/test_validation.py M sklearn/utils/validation.py Log Message: ----------- [MRG+1] MAINT dissociate nan and inf in check_array (#10459)

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[scikit-learn/scikit-learn] cc50b9: MAINT: do not collect any tests in externals.
by GitHub Jan. 18, 2018

Jan. 18, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: cc50b90034a9cda77a8aabedc8a853fe92de60b5 https://github.com/scikit-learn/scikit-learn/commit/cc50b90034a9cda77a8aabe… Author: Loïc Estève <loic.esteve(a)ymail.com> Date: 2018-01-18 (Thu, 18 Jan 2018) Changed paths: M setup.cfg A sklearn/externals/conftest.py Log Message: ----------- MAINT: do not collect any tests in externals.

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[scikit-learn/scikit-learn] de9d05: [MRG+1]DOC StratifiedKFold docstring fix (#10155)
by GitHub Jan. 18, 2018

Jan. 18, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: de9d05f426b9064a8d821551b329833928662206 https://github.com/scikit-learn/scikit-learn/commit/de9d05f426b9064a8d82155… Author: William de Vazelhes <31916524+wdevazelhes(a)users.noreply.github.com> Date: 2018-01-18 (Thu, 18 Jan 2018) Changed paths: M sklearn/cross_validation.py M sklearn/model_selection/_split.py Log Message: ----------- [MRG+1]DOC StratifiedKFold docstring fix (#10155)

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