Mailman 3 September 2018 - Scikit-learn-commits

[scikit-learn/scikit-learn]
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/tags/0.20.0 Home: https://github.com/scikit-learn/scikit-learn **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn] cbd65b: BUG: check equality instead of identity in check_c...
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/heads/0.20.X Home: https://github.com/scikit-learn/scikit-learn Commit: cbd65b4868781879a735b2f7b5e549fde3dbd452 https://github.com/scikit-learn/scikit-learn/commit/cbd65b4868781879a735b2f… Author: Guillaume Lemaitre <g.lemaitre58(a)gmail.com> Date: 2018-09-25 (Tue, 25 Sep 2018) Changed paths: M sklearn/model_selection/_split.py M sklearn/model_selection/tests/test_validation.py Log Message: ----------- BUG: check equality instead of identity in check_cv (#12155) **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn]
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/tags/0.20.0 Home: https://github.com/scikit-learn/scikit-learn **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn]
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/tags/0.20.0 Home: https://github.com/scikit-learn/scikit-learn **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn]
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/tags/0.20.0 Home: https://github.com/scikit-learn/scikit-learn **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn] 8338b3: DOCS: noting y is present in one-class fit methods...
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/heads/0.20.X Home: https://github.com/scikit-learn/scikit-learn Commit: 8338b31359ae435690517d7e4d0fd9aee319d138 https://github.com/scikit-learn/scikit-learn/commit/8338b31359ae435690517d7… Author: Pradeep Reddy Raamana <raamana(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/base.py M sklearn/cluster/k_means_.py M sklearn/covariance/elliptic_envelope.py M sklearn/ensemble/iforest.py M sklearn/metrics/classification.py M sklearn/neighbors/lof.py M sklearn/svm/classes.py Log Message: ----------- DOCS: noting y is present in one-class fit methods merely for API consistency (#11939) Commit: bfe2bb78d3edfcaa1d82d6a013d16e845f682f15 https://github.com/scikit-learn/scikit-learn/commit/bfe2bb78d3edfcaa1d82d6a… Author: Nicolas Hug <contact(a)nicolas-hug.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/ensemble/gradient_boosting.py Log Message: ----------- COSMIT Mimimal refactoring of gradient_boosting.py (#11921) Commit: 161e6284b237e034abfa2f6deef14998748d557a https://github.com/scikit-learn/scikit-learn/commit/161e6284b237e034abfa2f6… Author: Joel Nothman <joel.nothman(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/__init__.py Log Message: ----------- Set final version Commit: 08674f4d8ccd2bc0d0f7010a118d66b83584d264 https://github.com/scikit-learn/scikit-learn/commit/08674f4d8ccd2bc0d0f7010… Author: Ryan <ryantlee9(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/modules/model_persistence.rst Log Message: ----------- DOC Replace 'interesting' with 'better' for model_persistence (#11946) 'interesting' isn't directly supported by the following claim (i.e., that joblib can be more efficient than pickle), and also describing this as interesting isn't very useful to the user in my opinion. Commit: c9c702e4db29cfc92522cf00ebf36bfd3946c087 https://github.com/scikit-learn/scikit-learn/commit/c9c702e4db29cfc92522cf0… Author: Hanmin Qin <qinhanmin2005(a)sina.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/install.rst Log Message: ----------- DOC Update Anaconda download link Commit: e169167f2221b780d6c2d995b2fdb130e0d8586c https://github.com/scikit-learn/scikit-learn/commit/e169167f2221b780d6c2d99… Author: jakirkham <jakirkham(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/decomposition/dict_learning.py Log Message: ----------- MNT: Use `nrm2` to find the residuals squared (#11923) Commit: 74c34f0e3acf760391909c43ab6761543eca3482 https://github.com/scikit-learn/scikit-learn/commit/74c34f0e3acf760391909c4… Author: Andreas Mueller <t3kcit(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M examples/compose/plot_column_transformer_mixed_types.py Log Message: ----------- EXA Simplifying column transformer example by removing default values / making use of sparse threshold (#11958) Commit: 8d25ff7b91cb772f2e32a09fb2ec3a2eaf1d230c https://github.com/scikit-learn/scikit-learn/commit/8d25ff7b91cb772f2e32a09… Author: Sebastian Raschka <mail(a)sebastianraschka.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/whats_new/v0.20.rst Log Message: ----------- typo and formatting fixes in 0.20 doc (#11963) Commit: 4bf90511db27b3159c306cf7f20a56f6d2c7e3d0 https://github.com/scikit-learn/scikit-learn/commit/4bf90511db27b3159c306cf… Author: Andreas Mueller <t3kcit(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M examples/neural_networks/plot_mnist_filters.py Log Message: ----------- FIX divide mnist features by 255 in mlp example (#11961) Commit: 67280bf48dc42b76fc829abf0d7b93a7b699f2a5 https://github.com/scikit-learn/scikit-learn/commit/67280bf48dc42b76fc829ab… Author: Loïc Estève <loic.esteve(a)ymail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/svm/tests/test_sparse.py Log Message: ----------- MNT: remove pytest imported twice. Minor reorder of the imports as well. Commit: a7a88141d64442da39f8b81b7f77a13b96021e39 https://github.com/scikit-learn/scikit-learn/commit/a7a88141d64442da39f8b81… Author: Joan Massich <mailsik(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/utils/sparsefuncs_fast.pyx Log Message: ----------- Remove unnecessary copy for float64 in sparsefuncs_fast (#11966) Commit: 845485760201463340ee7480f20c4154dc8bc4dc https://github.com/scikit-learn/scikit-learn/commit/845485760201463340ee748… Author: Thomas Fan <thomasjpfan(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/datasets/openml.py M sklearn/datasets/tests/test_openml.py Log Message: ----------- ENH Uses gzip when caching in fetch_openml (#11830) Commit: d6f8f4f54c6ba4801c1f8591778e1bd516013ef6 https://github.com/scikit-learn/scikit-learn/commit/d6f8f4f54c6ba4801c1f859… Author: Hanmin Qin <qinhanmin2005(a)sina.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/cluster/dbscan_.py Log Message: ----------- DOC Format in DBSCAN Commit: 443a729b8cacea572cb25008e1d572d3ff9680d3 https://github.com/scikit-learn/scikit-learn/commit/443a729b8cacea572cb2500… Author: Piotr Szymański <niedakh(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/related_projects.rst Log Message: ----------- DOC adding scikit-multilearn to related projects list (#11988) Commit: 3909395ba1ee037c5309e163dcb64e6e686557a1 https://github.com/scikit-learn/scikit-learn/commit/3909395ba1ee037c5309e16… Author: William de Vazelhes <31916524+wdevazelhes(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/model_selection/tests/test_search.py M sklearn/utils/tests/test_validation.py Log Message: ----------- TST FIX use match rather than message in pytest.raises (#12001) Previously these assertions would pass without matching. Commit: 4c472f3f7e4b71bac9e11dc45c84b0c9fc2a35e2 https://github.com/scikit-learn/scikit-learn/commit/4c472f3f7e4b71bac9e11dc… Author: Joel Nothman <joel.nothman(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/metrics/classification.py Log Message: ----------- DOC note controversy on multiclass balanced accuracy definition (#11994) Commit: 475179d173c98c735c32cb997027d8b6fe1225b6 https://github.com/scikit-learn/scikit-learn/commit/475179d173c98c735c32cb9… Author: jakirkham <jakirkham(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/linear_model/cd_fast.pyx Log Message: ----------- MNT Use `fmax` when finding the maximum (#12005) Instead of adding an `if` to check for values that become the new max, simply use `fmax` to get the maximum and update the value. This improves readability. It may improve performance as `fmax` can be a single assembly instruction. Though most compilers can probably figure this out anyways. Commit: 3a95c576154cecbac1b9ac1a77046bf29d4312d7 https://github.com/scikit-learn/scikit-learn/commit/3a95c576154cecbac1b9ac1… Author: Albert Thomas <albertthomas88(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/modules/outlier_detection.rst Log Message: ----------- DOC small changes in outlier detection documentation (#12003) Commit: 0728dc57f69b9a2fe4047d359b51d3933d2f6a1b https://github.com/scikit-learn/scikit-learn/commit/0728dc57f69b9a2fe4047d3… Author: Olivier Grisel <olivier.grisel(a)ensta.org> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M setup.cfg Log Message: ----------- MAINT make pytest collection ignore folders with Python scripts (#12011) Some IDEs such as VS Code use the pytest command to collect all the tests of the workspace in the background. This can cause unexpected execution of arbitrary Python scripts in the workspace (examples, benchmarks...). The doc folder is also ignored because it has python scripts for sphinx along with copies of the examples. To safely run pytest in the doc folder, we need to used the find command to find all "*.rst" files as done in the project Makefile. Commit: 6c5a6e829272bd8ab6adbf0b132ac9edd8b53dfd https://github.com/scikit-learn/scikit-learn/commit/6c5a6e829272bd8ab6adbf0… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/whats_new/v0.20.rst M sklearn/cluster/mean_shift_.py M sklearn/cluster/tests/test_mean_shift.py Log Message: ----------- [MRG+1] break the tie in Meanshift in case cluster intensities are the same (#11901) Commit: 3b10c052556f77b8ff468fd0f2c88ea1a3aab4a8 https://github.com/scikit-learn/scikit-learn/commit/3b10c052556f77b8ff468fd… Author: Gabriele Calvo <gcalvo87(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/datasets/descr/iris.rst Log Message: ----------- DOC fix minor spacing issue in the iris dataset description (#12019) Commit: 6be146c0b17350e869f294abbd04b9343842da08 https://github.com/scikit-learn/scikit-learn/commit/6be146c0b17350e869f294a… Author: Joel Nothman <joel.nothman(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/datasets/tests/test_openml.py Log Message: ----------- TST use urlopen monkeypatch for test_decode_* (#12020) Avoid requiring internet for test suite. Examples will still run with internet (as long as cache is occasionally cleared). Commit: afd07e9102931efa15047fe18d3811fcec264e42 https://github.com/scikit-learn/scikit-learn/commit/afd07e9102931efa15047fe… Author: Vivek Kumar <vivekk0903(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/ensemble/gradient_boosting.py Log Message: ----------- DOC gradient boosting fit() supports sparse X (#12022) Commit: 9122de8209ecb421c44c92405490c959267815dc https://github.com/scikit-learn/scikit-learn/commit/9122de8209ecb421c44c924… Author: William de Vazelhes <31916524+wdevazelhes(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M README.rst M conftest.py M doc/developers/advanced_installation.rst Log Message: ----------- DOC: Add pytest version in documentation (#12002) Commit: e4d9ece849739fa98578d51aad8d566711b5adfc https://github.com/scikit-learn/scikit-learn/commit/e4d9ece849739fa98578d51… Author: Umar Farouk Umar <papaonlegs(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/datasets/descr/linnerud.rst Log Message: ----------- DOC fix for linnerud dataset (#12024) The descriptions were the wrong way around Commit: 09d97364c1f27680d0e2112475a781aeec8123d6 https://github.com/scikit-learn/scikit-learn/commit/09d97364c1f27680d0e2112… Author: Olivier Grisel <olivier.grisel(a)ensta.org> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/tests/test_site_joblib.py Log Message: ----------- MAINT skip joblib vendor test on debian (#12027) Commit: 9aeb86493c282ddb0b1ddd7d0ae11307d8679962 https://github.com/scikit-learn/scikit-learn/commit/9aeb86493c282ddb0b1ddd7… Author: jeremiedbb <34657725+jeremiedbb(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/neural_network/rbm.py Log Message: ----------- MNT Fix utils.sparse import in neural_network.rbm (#12032) Commit: f47c36051b8560751a70c75c72a09b85322990a4 https://github.com/scikit-learn/scikit-learn/commit/f47c36051b8560751a70c75… Author: Joel Nothman <joel.nothman(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/modules/ensemble.rst M doc/modules/tree.rst M doc/whats_new/v0.20.rst M examples/ensemble/plot_adaboost_hastie_10_2.py M examples/ensemble/plot_gradient_boosting_oob.py M examples/ensemble/plot_gradient_boosting_quantile.py M sklearn/ensemble/forest.py M sklearn/ensemble/gradient_boosting.py M sklearn/ensemble/tests/test_forest.py M sklearn/ensemble/tests/test_gradient_boosting.py M sklearn/tree/tests/test_tree.py M sklearn/tree/tree.py Log Message: ----------- MNT Revert the deprecation of min_samples_leaf and min_weight_fraction_leaf (#11998) Commit: 9de62e83fdee5aaf4caa1320fe20fd79d694536a https://github.com/scikit-learn/scikit-learn/commit/9de62e83fdee5aaf4caa132… Author: Max Copeland <maxcopeland88(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M examples/gaussian_process/plot_gpr_co2.py Log Message: ----------- EXA use openml fetcher in plot_gpr_co2.py example (#12004) Commit: dea10b418b5555bff0d971672d3dbbed46ebfd3b https://github.com/scikit-learn/scikit-learn/commit/dea10b418b5555bff0d9716… Author: Roman Yurchak <rth.yurchak(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M build_tools/travis/install.sh Log Message: ----------- CI Workaround to test numpy 1.8.2 and scipy 0.13.3 (#12042) Commit: 7b450871d765ec8ff7da8bb8442d9cf79da26ff0 https://github.com/scikit-learn/scikit-learn/commit/7b450871d765ec8ff7da8bb… Author: vqean3 <vqean3(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/svm/classes.py Log Message: ----------- DOC `sample_weight` removed from the docs in `SVR` class. (#12046) Commit: e948cc27e9679d7c57e75ddcf1045e4ceeaddd11 https://github.com/scikit-learn/scikit-learn/commit/e948cc27e9679d7c57e75dd… Author: Rüdiger Busche <ruedigerbusche(a)web.de> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/dummy.py Log Message: ----------- MNT Unify and refactor strategy error (#12050) Commit: 7ac78982eefed2263284cb0140f81028e48dabce https://github.com/scikit-learn/scikit-learn/commit/7ac78982eefed2263284cb0… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/linear_model/base.py M sklearn/linear_model/coordinate_descent.py M sklearn/linear_model/huber.py M sklearn/linear_model/least_angle.py M sklearn/linear_model/omp.py M sklearn/linear_model/ransac.py M sklearn/linear_model/theil_sen.py Log Message: ----------- [MRG] DOC Examples added to the rest of linear models (#11975) Commit: 3c4201a92d5c67ab2e91f843e41323ee9b251ca6 https://github.com/scikit-learn/scikit-learn/commit/3c4201a92d5c67ab2e91f84… Author: Tom Dupré la Tour <tom.dupre-la-tour(a)m4x.org> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: R AUTHORS.rst A build_tools/Makefile A build_tools/generate_authors_table.py M doc/about.rst A doc/authors.rst M doc/developers/maintainer.rst Log Message: ----------- DOC Generated author list from github (#11708) Commit: c7ff8c5006003fe40dcc9c2b31358f1ffe8557af https://github.com/scikit-learn/scikit-learn/commit/c7ff8c5006003fe40dcc9c2… Author: Rüdiger Busche <ruedigerbusche(a)web.de> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/whats_new/v0.20.rst M sklearn/dummy.py M sklearn/tests/test_dummy.py Log Message: ----------- ENH Allow scoring of dummies without testsamples (#11957) Commit: c625dc1c498c5ca141c4e946ca559d9305d4a7cb https://github.com/scikit-learn/scikit-learn/commit/c625dc1c498c5ca141c4e94… Author: Zijie (ZJ) Poh <8103276+zjpoh(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/decomposition/nmf.py Log Message: ----------- DOC Fix docstring inconsistency in nmf.py (#12063) Commit: 09b84347ebab0c6df4e6d0f29aaa3933287c5db9 https://github.com/scikit-learn/scikit-learn/commit/09b84347ebab0c6df4e6d0f… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/cluster/tests/test_k_means.py M sklearn/datasets/mlcomp.py M sklearn/externals/_arff.py M sklearn/model_selection/tests/test_search.py Log Message: ----------- MAINT Fix invalid escape sequence (#12064) Commit: 48ae9fff3d8707d74ffa4b508585440bbc063fed https://github.com/scikit-learn/scikit-learn/commit/48ae9fff3d8707d74ffa4b5… Author: Zach Griffith <griffitzd(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/modules/lda_qda.rst Log Message: ----------- DOC fix typos in documentation. (#12059) Commit: c53c2ea9d0ea14d74cc9abbd6facc3db2713fa41 https://github.com/scikit-learn/scikit-learn/commit/c53c2ea9d0ea14d74cc9abb… Author: Hanmin Qin <qinhanmin2005(a)sina.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/datasets/index.rst R doc/datasets/openml.rst M sklearn/datasets/openml.py Log Message: ----------- DOC Include fetch_openml doc in user guide (#12065) Commit: c4f4285927cd806454c4258f6093389d25d7da05 https://github.com/scikit-learn/scikit-learn/commit/c4f4285927cd806454c4258… Author: Roman Yurchak <rth.yurchak(a)pm.me> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/themes/scikit-learn/layout.html Log Message: ----------- MNT: Anonimize IP for Google Analytics (#12038) Commit: 2da27372a1e85eced163695334fb23973766739e https://github.com/scikit-learn/scikit-learn/commit/2da27372a1e85eced163695… Author: Roman Yurchak <rth.yurchak(a)pm.me> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/ensemble/tests/test_voting_classifier.py M sklearn/model_selection/tests/test_split.py Log Message: ----------- TST Use pytest.raises instead of legacy constructions (#12057) Commit: bb0ab59980bf84c233120f1f330ba6aaff9f6aa2 https://github.com/scikit-learn/scikit-learn/commit/bb0ab59980bf84c233120f1… Author: Joris Van den Bossche <jorisvandenbossche(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/preprocessing/_encoders.py M sklearn/preprocessing/tests/test_encoders.py Log Message: ----------- BUG always raise on NaN in OneHotEncoder for object dtype data (#12033) Commit: 98e29a3970ee5912d4c2b15fdf0db20d8b5a2d4d https://github.com/scikit-learn/scikit-learn/commit/98e29a3970ee5912d4c2b15… Author: Olivier Grisel <olivier.grisel(a)ensta.org> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/externals/joblib/__init__.py M sklearn/externals/joblib/externals/cloudpickle/__init__.py M sklearn/externals/joblib/externals/cloudpickle/cloudpickle.py M sklearn/externals/joblib/externals/loky/__init__.py M sklearn/externals/joblib/externals/loky/process_executor.py Log Message: ----------- MAINT joblib 0.12.5 (#12066) Commit: 7c360b7228fad2177cb7c665883b551dd893af9b https://github.com/scikit-learn/scikit-learn/commit/7c360b7228fad2177cb7c66… Author: Thomas Fan <thomasjpfan(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M doc/modules/compose.rst M doc/whats_new/v0.20.rst M sklearn/pipeline.py M sklearn/tests/test_pipeline.py Log Message: ----------- ENH Adds drop in FeatureUnion (#11640) Commit: b287515fc1f7475077f40f06e3bd31cf2c668d91 https://github.com/scikit-learn/scikit-learn/commit/b287515fc1f7475077f40f0… Author: Zijie (ZJ) Poh <8103276+zjpoh(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/neighbors/__init__.py M sklearn/neighbors/base.py Log Message: ----------- ENH Better error message for metrics of neighbors (#11914) Commit: 0a7cc19315262646b6633c79e74fea3f7ecb0e7b https://github.com/scikit-learn/scikit-learn/commit/0a7cc19315262646b6633c7… Author: Hanmin Qin <qinhanmin2005(a)sina.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/tests/test_pipeline.py Log Message: ----------- MNT Duplicate import in test_pipeline.py Travis failed to detect it in #11640 Commit: 81139da4735ad5ce48b43a71d39531201ce74a34 https://github.com/scikit-learn/scikit-learn/commit/81139da4735ad5ce48b43a7… Author: Zijie (ZJ) Poh <8103276+zjpoh(a)users.noreply.github.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M sklearn/neighbors/__init__.py M sklearn/neighbors/base.py Log Message: ----------- ENH Better error message for sparse metrics of neighbors (#12073) Commit: 99557bf0952975abdc325d488c7e05c86cb1e0df https://github.com/scikit-learn/scikit-learn/commit/99557bf0952975abdc325d4… Author: Guillaume Lemaitre <g.lemaitre58(a)gmail.com> Date: 2018-09-17 (Mon, 17 Sep 2018) Changed paths: M conftest.py Log Message: ----------- MAINT: skip doctest for 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<rth.yurchak(a)pm.me> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M .circleci/config.yml M build_tools/circle/build_test_pypy.sh M conftest.py M sklearn/feature_extraction/tests/test_text.py M sklearn/tests/test_docstring_parameters.py Log Message: ----------- [MRG] MNT Re-enable PyPy CI (#12039) Commit: 6f0133aee7614a7b4982d7b12faa2681bb2055e3 https://github.com/scikit-learn/scikit-learn/commit/6f0133aee7614a7b4982d7b… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M sklearn/ensemble/bagging.py Log Message: ----------- DOC BaggingRegressor missing default value for oob_score in docstring (#12108) Commit: acc23c63bec04ea71f5324ca21a567007847bea4 https://github.com/scikit-learn/scikit-learn/commit/acc23c63bec04ea71f5324c… Author: louib <louib(a)users.noreply.github.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M doc/modules/feature_extraction.rst Log Message: ----------- DOC Removing quotes from variant names. (#12113) Commit: 9b470f19069f4c6bc64cdb44d258354494a551e5 https://github.com/scikit-learn/scikit-learn/commit/9b470f19069f4c6bc64cdb4… Author: Albert Thomas <albertthomas88(a)gmail.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M sklearn/preprocessing/_encoders.py Log Message: ----------- DOC Update fit_transform docstring of OneHotEncoder (#12117) Commit: 8a67ff0e8cae4653bdc270362b6194fbc377565e https://github.com/scikit-learn/scikit-learn/commit/8a67ff0e8cae4653bdc2703… Author: Hanmin Qin <qinhanmin2005(a)sina.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M sklearn/preprocessing/_encoders.py Log Message: ----------- DOC Typo in OneHotEncoder Commit: e6f7b91f9d683054a0c6e92562fc165c3dcf757f https://github.com/scikit-learn/scikit-learn/commit/e6f7b91f9d683054a0c6e92… Author: Dmitry Mottl <dmitry.mottl(a)gmail.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M examples/compose/plot_column_transformer.py Log Message: ----------- Fix typo (#12126) Fix typo in `examples/compose/plot_column_transformer.py` Commit: 1dc0205daa15c8c80e8019b40bccf1c75b503e76 https://github.com/scikit-learn/scikit-learn/commit/1dc0205daa15c8c80e8019b… Author: Joris Van den Bossche <jorisvandenbossche(a)gmail.com> Date: 2018-09-23 (Sun, 23 Sep 2018) Changed paths: M sklearn/compose/_column_transformer.py M sklearn/compose/tests/test_column_transformer.py Log Message: ----------- [MRG +1] ColumnTransformer: store evaluated function column specifier during fit (#12107) Commit: f3e29a4063abfc58e19f23c6ef7660582b505fe7 https://github.com/scikit-learn/scikit-learn/commit/f3e29a4063abfc58e19f23c… Author: Sriharsha Hatwar <sriharsha02hatwar(a)gmail.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M sklearn/ensemble/gradient_boosting.py Log Message: ----------- DOC Replaced the deprecated early_stopping parameter with n_iter_no_change. (#12133) Commit: 9476808b68d172c32614147e6bd1032d759bb085 https://github.com/scikit-learn/scikit-learn/commit/9476808b68d172c32614147… Author: Sebastian Raschka <mail(a)sebastianraschka.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Log Message: ----------- typo and formatting fixes in 0.20 doc (#11963) Commit: 673218c6a9121712a11f88398ea5b9c2c27c5f28 https://github.com/scikit-learn/scikit-learn/commit/673218c6a9121712a11f883… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M sklearn/covariance/elliptic_envelope.py M sklearn/covariance/empirical_covariance_.py M sklearn/covariance/robust_covariance.py M sklearn/covariance/shrunk_covariance_.py Log Message: ----------- [MRG] DOC covariance doctest examples (#12124) Commit: ab1136d16c22547064c37783d118b92283ed9c8d https://github.com/scikit-learn/scikit-learn/commit/ab1136d16c22547064c3778… Author: Nicolas Hug <contact(a)nicolas-hug.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M doc/modules/tree.rst Log Message: ----------- DOC Removed duplicated doc in tree.rst (#11922) Commit: 55d4433a7879385282bdc31ea68c9d4d5a10f2c1 https://github.com/scikit-learn/scikit-learn/commit/55d4433a7879385282bdc31… Author: Oliver Rausch <oliverrausch(a)users.noreply.github.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M sklearn/tests/test_metaestimators.py Log Message: ----------- [MRG] Update test_metaestimators to pass y parameter when calling score (#12089) Commit: 7331c3a61a70b8685b71f0e0ad27dae33ccdd9de https://github.com/scikit-learn/scikit-learn/commit/7331c3a61a70b8685b71f0e… Author: Olivier Grisel <olivier.grisel(a)ensta.org> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M .circleci/config.yml M README.rst M examples/calibration/plot_compare_calibration.py M examples/classification/plot_classification_probability.py M examples/compose/plot_column_transformer_mixed_types.py M examples/compose/plot_digits_pipe.py M examples/ensemble/plot_feature_transformation.py M examples/ensemble/plot_voting_probas.py M examples/exercises/plot_digits_classification_exercise.py M examples/linear_model/plot_iris_logistic.py M examples/linear_model/plot_logistic.py M examples/linear_model/plot_logistic_l1_l2_sparsity.py M examples/linear_model/plot_logistic_path.py M examples/multioutput/plot_classifier_chain_yeast.py M examples/neural_networks/plot_rbm_logistic_classification.py Log Message: ----------- [MRG] Fix FutureWarnings in logistic regression examples (#12114) * Be more specific about logistic regression solver in examples * Use early stopped SGD (faster) and plot cross-validated error for best models * Fix LR solver in /plot_voting_probas.pyexamples/ensemble/plot_voting_probas.py * Fix LR solver & scale data in plot_digits_classification_exercise.py * Use saga solver in plot_logistic_l1_l2_sparsity.py * Use LBFGS solver in plot_iris_logistic.py * Use LBFGS in plot_logistic.py * Use SAGA solver for Logistic Regression Path example * Use LBFGS solver in plot_classifier_chain_yeast.py * Use LBFGS solver in plot_rbm_logistic_classification.py * typo * typo * Bump up pandas dependency to 0.17.1 * Bump up examples minimal deps to match pandas 0.17.1 * Fix figure layout for plot_digits_pipe.py * Version numbers are not decimal numbers * Set multinomial, no scaling to keep example simple, fix formatting of example doc * Missing plt.tight_layout() in plot_voting_probas.py * Missing plt.tight_layout() in plot_logistic.py Compare: https://github.com/scikit-learn/scikit-learn/compare/8d8939bdc3ed...7331c3a… **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn] 5431a1: BUG: check equality instead of identity in check_c...
by GitHub Sept. 25, 2018

Sept. 25, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 5431a1a9bfaf1927fade31492ac2b63423ad6384 https://github.com/scikit-learn/scikit-learn/commit/5431a1a9bfaf1927fade314… Author: Guillaume Lemaitre <g.lemaitre58(a)gmail.com> Date: 2018-09-25 (Tue, 25 Sep 2018) Changed paths: M sklearn/model_selection/_split.py M sklearn/model_selection/tests/test_validation.py Log Message: ----------- BUG: check equality instead of identity in check_cv (#12155) **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn]
by GitHub Sept. 24, 2018

Sept. 24, 2018

Branch: refs/tags/0.20.0 Home: https://github.com/scikit-learn/scikit-learn **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn] 8d8939: 0.20postrc again (#12151)
by GitHub Sept. 24, 2018

Sept. 24, 2018

Branch: refs/heads/0.20.X Home: https://github.com/scikit-learn/scikit-learn Commit: 8d8939bdc3ed91ef5a84aa73628cb776af0d986d https://github.com/scikit-learn/scikit-learn/commit/8d8939bdc3ed91ef5a84aa7… Author: Andreas Mueller <t3kcit(a)gmail.com> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M .circleci/config.yml M .travis.yml R AUTHORS.rst M README.rst M appveyor.yml A build_tools/Makefile M build_tools/circle/build_test_pypy.sh A build_tools/generate_authors_table.py M build_tools/travis/test_script.sh M conftest.py M doc/about.rst A doc/authors.rst M doc/datasets/index.rst R doc/datasets/openml.rst M doc/developers/advanced_installation.rst M doc/developers/maintainer.rst M doc/install.rst M doc/modules/compose.rst M doc/modules/ensemble.rst M doc/modules/feature_extraction.rst M doc/modules/lda_qda.rst M doc/modules/model_persistence.rst M doc/modules/outlier_detection.rst M doc/modules/svm.rst M doc/modules/tree.rst M doc/related_projects.rst M doc/themes/scikit-learn/layout.html M doc/whats_new/v0.20.rst M examples/calibration/plot_compare_calibration.py M examples/classification/plot_classification_probability.py M examples/compose/plot_column_transformer.py M examples/compose/plot_column_transformer_mixed_types.py M examples/compose/plot_digits_pipe.py M examples/ensemble/plot_adaboost_hastie_10_2.py M examples/ensemble/plot_feature_transformation.py M examples/ensemble/plot_gradient_boosting_oob.py M examples/ensemble/plot_gradient_boosting_quantile.py M examples/ensemble/plot_voting_probas.py M examples/exercises/plot_digits_classification_exercise.py M examples/gaussian_process/plot_gpr_co2.py M examples/linear_model/plot_iris_logistic.py M examples/linear_model/plot_logistic.py M examples/linear_model/plot_logistic_l1_l2_sparsity.py M examples/linear_model/plot_logistic_path.py M examples/multioutput/plot_classifier_chain_yeast.py M examples/neural_networks/plot_mnist_filters.py M examples/neural_networks/plot_rbm_logistic_classification.py M setup.cfg M sklearn/__init__.py M sklearn/base.py M sklearn/cluster/dbscan_.py M sklearn/cluster/k_means_.py M sklearn/cluster/mean_shift_.py M sklearn/cluster/tests/test_k_means.py M sklearn/cluster/tests/test_mean_shift.py M sklearn/compose/_column_transformer.py M sklearn/compose/tests/test_column_transformer.py M sklearn/covariance/elliptic_envelope.py M sklearn/covariance/empirical_covariance_.py M sklearn/covariance/robust_covariance.py M sklearn/covariance/shrunk_covariance_.py M sklearn/datasets/descr/iris.rst M sklearn/datasets/descr/linnerud.rst M sklearn/datasets/mlcomp.py M sklearn/datasets/openml.py M sklearn/datasets/tests/test_openml.py M sklearn/decomposition/dict_learning.py M sklearn/decomposition/nmf.py M sklearn/dummy.py M sklearn/ensemble/bagging.py M sklearn/ensemble/forest.py M sklearn/ensemble/gradient_boosting.py M sklearn/ensemble/iforest.py M sklearn/ensemble/tests/test_forest.py M sklearn/ensemble/tests/test_gradient_boosting.py M sklearn/ensemble/tests/test_voting_classifier.py M sklearn/externals/_arff.py M sklearn/externals/joblib/__init__.py M sklearn/externals/joblib/externals/cloudpickle/__init__.py M sklearn/externals/joblib/externals/cloudpickle/cloudpickle.py M sklearn/externals/joblib/externals/loky/__init__.py M sklearn/externals/joblib/externals/loky/process_executor.py M sklearn/feature_extraction/tests/test_text.py M sklearn/linear_model/base.py M sklearn/linear_model/cd_fast.pyx M sklearn/linear_model/coordinate_descent.py M sklearn/linear_model/huber.py M sklearn/linear_model/least_angle.py M sklearn/linear_model/omp.py M sklearn/linear_model/ransac.py M sklearn/linear_model/stochastic_gradient.py M sklearn/linear_model/theil_sen.py M sklearn/metrics/classification.py M sklearn/model_selection/tests/test_search.py M sklearn/model_selection/tests/test_split.py M sklearn/neighbors/__init__.py M sklearn/neighbors/base.py M sklearn/neighbors/lof.py M sklearn/neural_network/rbm.py M sklearn/pipeline.py M sklearn/preprocessing/_encoders.py M sklearn/preprocessing/tests/test_encoders.py M sklearn/svm/classes.py M sklearn/svm/tests/test_sparse.py M sklearn/tests/test_common.py M sklearn/tests/test_docstring_parameters.py M sklearn/tests/test_dummy.py M sklearn/tests/test_metaestimators.py M sklearn/tests/test_pipeline.py M sklearn/tests/test_site_joblib.py M sklearn/tree/tests/test_tree.py M sklearn/tree/tree.py M sklearn/utils/sparsefuncs_fast.pyx M sklearn/utils/tests/test_validation.py Log Message: ----------- 0.20postrc again (#12151) Continuation of #11948 **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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[scikit-learn/scikit-learn] fc7d6e: [MRG] Fix FutureWarnings in logistic regression ex...
by GitHub Sept. 24, 2018

Sept. 24, 2018

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: fc7d6e698668b983cee2867b1bf3c65f1384e4cf https://github.com/scikit-learn/scikit-learn/commit/fc7d6e698668b983cee2867… Author: Olivier Grisel <olivier.grisel(a)ensta.org> Date: 2018-09-24 (Mon, 24 Sep 2018) Changed paths: M .circleci/config.yml M README.rst M examples/calibration/plot_compare_calibration.py M examples/classification/plot_classification_probability.py M examples/compose/plot_column_transformer_mixed_types.py M examples/compose/plot_digits_pipe.py M examples/ensemble/plot_feature_transformation.py M examples/ensemble/plot_voting_probas.py M examples/exercises/plot_digits_classification_exercise.py M examples/linear_model/plot_iris_logistic.py M examples/linear_model/plot_logistic.py M examples/linear_model/plot_logistic_l1_l2_sparsity.py M examples/linear_model/plot_logistic_path.py M examples/multioutput/plot_classifier_chain_yeast.py M examples/neural_networks/plot_rbm_logistic_classification.py Log Message: ----------- [MRG] Fix FutureWarnings in logistic regression examples (#12114) * Be more specific about logistic regression solver in examples * Use early stopped SGD (faster) and plot cross-validated error for best models * Fix LR solver in /plot_voting_probas.pyexamples/ensemble/plot_voting_probas.py * Fix LR solver & scale data in plot_digits_classification_exercise.py * Use saga solver in plot_logistic_l1_l2_sparsity.py * Use LBFGS solver in plot_iris_logistic.py * Use LBFGS in plot_logistic.py * Use SAGA solver for Logistic Regression Path example * Use LBFGS solver in plot_classifier_chain_yeast.py * Use LBFGS solver in plot_rbm_logistic_classification.py * typo * typo * Bump up pandas dependency to 0.17.1 * Bump up examples minimal deps to match pandas 0.17.1 * Fix figure layout for plot_digits_pipe.py * Version numbers are not decimal numbers * Set multinomial, no scaling to keep example simple, fix formatting of example doc * Missing plt.tight_layout() in plot_voting_probas.py * Missing plt.tight_layout() in plot_logistic.py **NOTE:** This service has been marked for deprecation: https://developer.github.com/changes/2018-04-25-github-services-deprecation/ Functionality will be removed from GitHub.com on January 31st, 2019.

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