Mailman 3 July 2019 - Scikit-learn-commits

[scikit-learn/scikit-learn] 370b64: FIX Adding max_fun parameter to MLP with lbfgs sol...
by Daniel Perry July 2, 2019

July 2, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 370b642f7ae44d4157001d09d3a4cf1a2b990847 https://github.com/scikit-learn/scikit-learn/commit/370b642f7ae44d4157001d0… Author: Daniel Perry <daniel-perry(a)users.noreply.github.com> Date: 2019-07-02 (Tue, 02 Jul 2019) Changed paths: M doc/whats_new/v0.22.rst M sklearn/neural_network/multilayer_perceptron.py M sklearn/neural_network/tests/test_mlp.py Log Message: ----------- FIX Adding max_fun parameter to MLP with lbfgs solver (#9274) Since MLP estimators doesn't provide the derivative of the objective function to `fmin_l_bfgs_b` it needs to be manually evaluated, and so the number of function calls can be significantly larger than the number of iterations.

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[scikit-learn/scikit-learn] faa940: EXA Better joblib caching in plot_compare_reductio...
by Kirill Dolmatov July 2, 2019

July 2, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: faa940608befaeca99db501609c6db796739f30f https://github.com/scikit-learn/scikit-learn/commit/faa940608befaeca99db501… Author: Kirill Dolmatov <dolmatov.ki(a)gmail.com> Date: 2019-07-02 (Tue, 02 Jul 2019) Changed paths: M examples/compose/plot_compare_reduction.py Log Message: ----------- EXA Better joblib caching in plot_compare_reduction.py (#14113)

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[scikit-learn/scikit-learn] f3eb9d: [MRG] MNT removing assert_equal, etc -- continued...
by Nicolas Hug July 2, 2019

July 2, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: f3eb9d2206f3c95604f5f22bee7d9343b3426ab9 https://github.com/scikit-learn/scikit-learn/commit/f3eb9d2206f3c95604f5f22… Author: Nicolas Hug <contact(a)nicolas-hug.com> Date: 2019-07-02 (Tue, 02 Jul 2019) Changed paths: M sklearn/feature_extraction/tests/test_dict_vectorizer.py M sklearn/feature_extraction/tests/test_feature_hasher.py M sklearn/feature_extraction/tests/test_image.py M sklearn/feature_extraction/tests/test_text.py M sklearn/feature_selection/tests/test_mutual_info.py M sklearn/feature_selection/tests/test_variance_threshold.py M sklearn/gaussian_process/tests/test_gpc.py M sklearn/gaussian_process/tests/test_gpr.py M sklearn/gaussian_process/tests/test_kernels.py M sklearn/linear_model/tests/test_ransac.py M sklearn/linear_model/tests/test_theil_sen.py M sklearn/manifold/tests/test_isomap.py M sklearn/metrics/cluster/tests/test_supervised.py M sklearn/neighbors/tests/test_kde.py M sklearn/neighbors/tests/test_nca.py M sklearn/neighbors/tests/test_nearest_centroid.py M sklearn/neural_network/tests/test_mlp.py M sklearn/neural_network/tests/test_stochastic_optimizers.py M sklearn/preprocessing/tests/test_function_transformer.py M sklearn/random_projection.py M sklearn/svm/tests/test_sparse.py M sklearn/tests/test_calibration.py M sklearn/tests/test_isotonic.py M sklearn/tree/tests/test_export.py M sklearn/utils/estimator_checks.py M sklearn/utils/testing.py M sklearn/utils/tests/test_estimator_checks.py M sklearn/utils/tests/test_random.py M sklearn/utils/tests/test_sparsefuncs.py M sklearn/utils/tests/test_testing.py M sklearn/utils/tests/test_utils.py Log Message: ----------- [MRG] MNT removing assert_equal, etc -- continued (#14232)

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[scikit-learn/scikit-learn] 1efbe1: FIX silently omitted tests in test_neighbors.py (#...
by Roman Feldbauer July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 1efbe186ebc13990756eaf822fce60a931e3c87b https://github.com/scikit-learn/scikit-learn/commit/1efbe186ebc13990756eaf8… Author: Roman Feldbauer <sci(a)feldbauer.org> Date: 2019-07-02 (Tue, 02 Jul 2019) Changed paths: M sklearn/neighbors/tests/test_neighbors.py Log Message: ----------- FIX silently omitted tests in test_neighbors.py (#14230)

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[scikit-learn/scikit-learn] 581b0e: MAINT Fix GCC warnings from Cython (#14077)
by Thomas J Fan July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 581b0e1d73414f47ef6cde6cd282667b7e767a36 https://github.com/scikit-learn/scikit-learn/commit/581b0e1d73414f47ef6cde6… Author: Thomas J Fan <thomasjpfan(a)gmail.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M sklearn/neighbors/quad_tree.pyx M sklearn/tree/_tree.pyx M sklearn/tree/_utils.pyx M sklearn/utils/graph_shortest_path.pyx M sklearn/utils/sparsefuncs_fast.pyx Log Message: ----------- MAINT Fix GCC warnings from Cython (#14077)

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[scikit-learn/scikit-learn] 27ad68: TST make deterministic RandomizedSearchCV example ...
by Guillaume Lemaitre July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 27ad68dbcefce99f3edab8df99f04d6c0d417d13 https://github.com/scikit-learn/scikit-learn/commit/27ad68dbcefce99f3edab8d… Author: Guillaume Lemaitre <g.lemaitre58(a)gmail.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M sklearn/model_selection/_search.py Log Message: ----------- TST make deterministic RandomizedSearchCV example (#14227)

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[scikit-learn/scikit-learn] 19c068: MNT towards removing assert_equal, etc (#14222)
by Adrin Jalali July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 19c068a2ec95b18bea41e717406d333ff2b6e94c https://github.com/scikit-learn/scikit-learn/commit/19c068a2ec95b18bea41e71… Author: Adrin Jalali <adrin.jalali(a)gmail.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M sklearn/cluster/tests/test_affinity_propagation.py M sklearn/cluster/tests/test_bicluster.py M sklearn/cluster/tests/test_birch.py M sklearn/cluster/tests/test_dbscan.py M sklearn/cluster/tests/test_hierarchical.py M sklearn/cluster/tests/test_k_means.py M sklearn/cluster/tests/test_optics.py M sklearn/cluster/tests/test_spectral.py M sklearn/compose/tests/test_column_transformer.py M sklearn/covariance/tests/test_covariance.py M sklearn/cross_decomposition/tests/test_pls.py M sklearn/datasets/tests/test_20news.py M sklearn/datasets/tests/test_base.py M sklearn/datasets/tests/test_covtype.py M sklearn/datasets/tests/test_kddcup99.py M sklearn/datasets/tests/test_lfw.py M sklearn/datasets/tests/test_rcv1.py M sklearn/datasets/tests/test_samples_generator.py M sklearn/datasets/tests/test_svmlight_format.py M sklearn/decomposition/tests/test_dict_learning.py M sklearn/decomposition/tests/test_factor_analysis.py M sklearn/decomposition/tests/test_fastica.py M sklearn/decomposition/tests/test_kernel_pca.py M sklearn/decomposition/tests/test_nmf.py M sklearn/decomposition/tests/test_online_lda.py M sklearn/decomposition/tests/test_sparse_pca.py M sklearn/ensemble/tests/test_bagging.py M sklearn/ensemble/tests/test_base.py M sklearn/ensemble/tests/test_forest.py M sklearn/ensemble/tests/test_gradient_boosting.py M sklearn/ensemble/tests/test_gradient_boosting_loss_functions.py M sklearn/ensemble/tests/test_iforest.py M sklearn/ensemble/tests/test_voting.py M sklearn/ensemble/tests/test_weight_boosting.py M sklearn/feature_extraction/tests/test_dict_vectorizer.py M sklearn/feature_extraction/tests/test_feature_hasher.py M sklearn/feature_extraction/tests/test_image.py M sklearn/feature_extraction/tests/test_text.py M sklearn/feature_selection/tests/test_base.py M sklearn/feature_selection/tests/test_feature_select.py M sklearn/feature_selection/tests/test_from_model.py M sklearn/feature_selection/tests/test_mutual_info.py M sklearn/feature_selection/tests/test_rfe.py M sklearn/feature_selection/tests/test_variance_threshold.py M sklearn/gaussian_process/tests/test_gpc.py M sklearn/gaussian_process/tests/test_gpr.py M sklearn/gaussian_process/tests/test_kernels.py M sklearn/linear_model/tests/test_base.py M sklearn/linear_model/tests/test_bayes.py M sklearn/linear_model/tests/test_coordinate_descent.py M sklearn/linear_model/tests/test_huber.py M sklearn/linear_model/tests/test_least_angle.py M sklearn/linear_model/tests/test_logistic.py M sklearn/linear_model/tests/test_omp.py M sklearn/linear_model/tests/test_passive_aggressive.py M sklearn/linear_model/tests/test_perceptron.py M sklearn/linear_model/tests/test_ransac.py M sklearn/linear_model/tests/test_ridge.py M sklearn/linear_model/tests/test_sag.py M sklearn/linear_model/tests/test_sgd.py M sklearn/linear_model/tests/test_sparse_coordinate_descent.py M sklearn/linear_model/tests/test_theil_sen.py M sklearn/manifold/tests/test_isomap.py M sklearn/manifold/tests/test_locally_linear.py M sklearn/manifold/tests/test_spectral_embedding.py M sklearn/manifold/tests/test_t_sne.py M sklearn/metrics/cluster/tests/test_bicluster.py M sklearn/metrics/cluster/tests/test_supervised.py M sklearn/metrics/cluster/tests/test_unsupervised.py M sklearn/metrics/tests/test_classification.py M sklearn/metrics/tests/test_common.py M sklearn/metrics/tests/test_pairwise.py M sklearn/metrics/tests/test_ranking.py M sklearn/metrics/tests/test_regression.py M sklearn/metrics/tests/test_score_objects.py M sklearn/mixture/tests/test_bayesian_mixture.py M sklearn/mixture/tests/test_gaussian_mixture.py M sklearn/model_selection/tests/test_search.py M sklearn/model_selection/tests/test_split.py M sklearn/model_selection/tests/test_validation.py M sklearn/neighbors/tests/test_kde.py M sklearn/neighbors/tests/test_lof.py M sklearn/neighbors/tests/test_nca.py M sklearn/neighbors/tests/test_nearest_centroid.py M sklearn/neighbors/tests/test_neighbors.py M sklearn/neural_network/tests/test_mlp.py M sklearn/neural_network/tests/test_stochastic_optimizers.py M sklearn/preprocessing/tests/test_data.py M sklearn/preprocessing/tests/test_function_transformer.py M sklearn/preprocessing/tests/test_label.py M sklearn/semi_supervised/tests/test_label_propagation.py M sklearn/svm/tests/test_sparse.py M sklearn/svm/tests/test_svm.py M sklearn/tests/test_base.py M sklearn/tests/test_calibration.py M sklearn/tests/test_common.py M sklearn/tests/test_discriminant_analysis.py M sklearn/tests/test_docstring_parameters.py M sklearn/tests/test_dummy.py M sklearn/tests/test_init.py M sklearn/tests/test_isotonic.py M sklearn/tests/test_kernel_approximation.py M sklearn/tests/test_multiclass.py M sklearn/tests/test_multioutput.py M sklearn/tests/test_naive_bayes.py M sklearn/tests/test_pipeline.py M sklearn/tests/test_random_projection.py M sklearn/tree/tests/test_export.py M sklearn/tree/tests/test_tree.py M sklearn/utils/estimator_checks.py M sklearn/utils/tests/test_class_weight.py M sklearn/utils/tests/test_estimator_checks.py M sklearn/utils/tests/test_extmath.py M sklearn/utils/tests/test_fast_dict.py M sklearn/utils/tests/test_multiclass.py M sklearn/utils/tests/test_murmurhash.py M sklearn/utils/tests/test_random.py M sklearn/utils/tests/test_sparsefuncs.py M sklearn/utils/tests/test_testing.py M sklearn/utils/tests/test_utils.py M sklearn/utils/tests/test_validation.py Log Message: ----------- MNT towards removing assert_equal, etc (#14222)

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[scikit-learn/scikit-learn] 5310b8: DOC Fix "Variables are collinear" warning in plots...
by KenitoInc July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 5310b87288fb5954814054530bccbd57692e1e08 https://github.com/scikit-learn/scikit-learn/commit/5310b87288fb59548140545… Author: Kennedy Kang'ethe <mungakennedyk(a)yahoo.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M examples/manifold/plot_lle_digits.py Log Message: ----------- DOC Fix "Variables are collinear" warning in plots_lle_digits (#14162)

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[scikit-learn/scikit-learn] c97727: DOC remove liblinear ConvergenceWarning from plot_...
by Gideon Sonoiya July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: c97727e8c80537a4a8779f4e9e3e0ed3ce8c184e https://github.com/scikit-learn/scikit-learn/commit/c97727e8c80537a4a8779f4… Author: Gideon Sonoiya <sonoiyagideon(a)gmail.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M examples/compose/plot_column_transformer.py Log Message: ----------- DOC remove liblinear ConvergenceWarning from plot_column_transformer (#14166)

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[scikit-learn/scikit-learn] 3aef9b: DOC add an example in randomizedSearchCV docstring...
by yokasre July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: 3aef9bd620f390ee95171f331983b0f0265a3c3d https://github.com/scikit-learn/scikit-learn/commit/3aef9bd620f390ee95171f3… Author: yokasre <37965744+Kasre96(a)users.noreply.github.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M sklearn/model_selection/_search.py Log Message: ----------- DOC add an example in randomizedSearchCV docstring (#14157)

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[scikit-learn/scikit-learn] bd2cc1: FIX Adjusts xi in test_extract_xi (#14201)
by Thomas J Fan July 1, 2019

July 1, 2019

Branch: refs/heads/master Home: https://github.com/scikit-learn/scikit-learn Commit: bd2cc1064829d9531558ae4e9c211ea85a9e628e https://github.com/scikit-learn/scikit-learn/commit/bd2cc1064829d9531558ae4… Author: Thomas J Fan <thomasjpfan(a)gmail.com> Date: 2019-07-01 (Mon, 01 Jul 2019) Changed paths: M sklearn/cluster/tests/test_optics.py Log Message: ----------- FIX Adjusts xi in test_extract_xi (#14201)

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