Dear Ali and SciPy,

Some time ago, I implemented another algorithm for the approximate solution of the QAP / Graph Matching: the Doubly Stochastic Projected Fixed-Point (DSPFP) algorithm proposed in Lu et al. (2016) [*]. Input and output are basically the same as the FAQ algorithm of Ali. If there is interest in adding approximate QAP / Graph Matching algorithms to SciPy, I'd happy to contribute with it:
  https://github.com/emanuele/DSPFP

Best,

Emanuele

[*] : http://dx.doi.org/10.1016/j.patcog.2016.07.015
Pre-print about the same manuscript and algorithm (named fastPFP at that time, 2012) here: https://arxiv.org/abs/1207.1114

On Thu, Feb 20, 2020 at 6:38 PM Ali Saad-Eldin <asaadel1@jhu.edu> wrote:
Hello!

I would like to add a Quadratic Approximation Problem (QAP) solver function, by implementing the Fast Approximate QAP (FAQ) algorithm (Vogelstein, 2015). QAP is a combinatorial optimization problem, and the FAQ algorithm can be applied to solve special cases of QAP, including the Graph Matching Problem (GMP) and the Traveling Salesman Problem (TSP).

Since the QAP is a combinatorial optimization problem, I'd like to have the FAQ implementation exposed through scipy.optimize. The module would accept parameters such as permutation initialization type (single barycenter initialization, or several initializations "close" to the barycenter), maximum Frank-Wolfe iterations, and whether you would like to solve a special case of the QAP (such as GMP). The module would fit with the two cost matrices in the objective function, returning the score (minimized objection function value) and indices of the optimal permutation matrix from the objective function. The implementation will also give the option to include seeds

I have already implemented FAQ in GraSPy, and proof of effectiveness can be found here .

Best,
Ali Saad-Eldin

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