Hi, I fail to build scipy. The the output of runing 'python setup.py install' is as following. 1. I also attached the output of running 2. python -c 'from numpy.f2py.diagnoise import run ; run()' 1. *****************************output of running install************************************************************ fft_opt_info: fftw3_info: /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['fftw3'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ FOUND: libraries = ['fftw3'] library_dirs = ['/usr/lib'] define_macros = [('SCIPY_FFTW3_H', None)] include_dirs = ['/usr/include'] djbfft_info: NOT AVAILABLE FOUND: libraries = ['fftw3'] library_dirs = ['/usr/lib'] define_macros = [('SCIPY_FFTW3_H', None)] include_dirs = ['/usr/include'] blas_opt_info: blas_mkl_info: /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['mkl', 'vml', 'guide'] found_libs=[ warnings.warn("Library error: libs=%s found_libs=%s" % \ NOT AVAILABLE atlas_blas_threads_info: Setting PTATLAS=ATLAS /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['ptf77blas', 'ptcblas', 'atlas'] fo warnings.warn("Library error: libs=%s found_libs=%s" % \ NOT AVAILABLE atlas_blas_info: /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['f77blas', 'cblas', 'atlas'] found_ warnings.warn("Library error: libs=%s found_libs=%s" % \ NOT AVAILABLE /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:1273: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. warnings.warn(AtlasNotFoundError.__doc__) blas_info: Replacing _lib_names[0]=='blas' with 'fblas' /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['fblas'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ Replacing _lib_names[0]=='fblas' with 'fblas' FOUND: libraries = ['fblas'] library_dirs = ['/usr/local/lib'] language = f77 FOUND: libraries = ['fblas'] library_dirs = ['/usr/local/lib'] define_macros = [('NO_ATLAS_INFO', 1)] language = f77 lapack_opt_info: lapack_mkl_info: mkl_info: NOT AVAILABLE NOT AVAILABLE atlas_threads_info: Setting PTATLAS=ATLAS /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['lapack_atlas'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ numpy.distutils.system_info.atlas_threads_info NOT AVAILABLE atlas_info: numpy.distutils.system_info.atlas_info NOT AVAILABLE /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:1192: UserWarning: Atlas (http://math-atlas.sourceforge.net/) libraries not found. Directories to search for the libraries can be specified in the numpy/distutils/site.cfg file (section [atlas]) or by setting the ATLAS environment variable. warnings.warn(AtlasNotFoundError.__doc__) lapack_info: Replacing _lib_names[0]=='lapack' with 'flapack' /usr/lib64/python2.4/site-packages/numpy/distutils/system_info.py:540: UserWarning: Library error: libs=['flapack'] found_libs=[] warnings.warn("Library error: libs=%s found_libs=%s" % \ Replacing _lib_names[0]=='flapack' with 'flapack' FOUND: libraries = ['flapack'] library_dirs = ['/usr/local/lib'] language = f77 FOUND: libraries = ['flapack', 'fblas'] library_dirs = ['/usr/local/lib'] define_macros = [('NO_ATLAS_INFO', 1)] language = f77 non-existing path in 'Lib/linsolve': 'tests' Traceback (most recent call last): File "setup.py", line 48, in ? setup_package() File "setup.py", line 34, in setup_package config.add_subpackage('Lib') File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 728, in add_subpackage caller_level = 2) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 711, in get_subpackage caller_level = caller_level + 1) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 660, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "./Lib/setup.py", line 12, in configuration config.add_subpackage('linsolve') File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 728, in add_subpackage caller_level = 2) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 711, in get_subpackage caller_level = caller_level + 1) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 660, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "Lib/linsolve/setup.py", line 58, in configuration config.add_subpackage( 'umfpack') File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 728, in add_subpackage caller_level = 2) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 711, in get_subpackage caller_level = caller_level + 1) File "/usr/lib64/python2.4/site-packages/numpy/distutils/misc_util.py", line 646, in _get_configuration_from_setup_py ('.py', 'U', 1)) File "Lib/linsolve/umfpack/setup.py", line 22 libraries = ['cblas'], ^ SyntaxError: invalid syntax 2. ********************output of running python -c ' from numpy.f2py.diagonose import run; run()' ************************************ ------ os.name='posix' ------ sys.platform='linux2' ------ sys.version: 2.4.2 (#1, Nov 10 2005, 13:31:13) [GCC 3.4.4 (Gentoo 3.4.4-r1, ssp-3.4.4-1.0, pie-8.7.8)] ------ sys.prefix: /usr ------ sys.path=':/usr/lib/portage/pym:/home/zhuang/EMAN/lib:/home/zhuang/EMAN2/lib:/usr/lib/python24.zip:/usr/lib/python2.4:/usr/lib/python2.4/plat-linux2:/usr/lib/python2.4/lib-tk:/usr/lib64/python2.4/lib-dynload:/usr/lib64/python2.4/site-packages:/usr/lib64/python2.4/site-packages/Numeric:/usr/lib64/python2.4/site-packages/PIL:/usr/lib64/python2.4/site-packages/gtk-2.0:/usr/lib/python2.4/site-packages:/usr/lib/python2.4/site-packages/Numeric:/usr/lib/python2.4/site-packages/PIL:/usr/lib/python2.4/site-packages/gtk-2.0' ------ Found Numeric version '23.7' in /usr/lib64/python2.4/site-packages/Numeric/Numeric.pyc Found numarray version '1.3.1' in /usr/lib64/python2.4/site-packages/numarray/__init__.pyc Found new numpy version '0.9.7.2308' in /usr/lib64/python2.4/site-packages/numpy/__init__.pyc Found f2py2e version '2_2308' in /usr/lib64/python2.4/site-packages/numpy/f2py/f2py2e.pyc Found numpy.distutils version '0.4.0' in '/usr/lib64/python2.4/site-packages/numpy/distutils/__init__.pyc' ------ Importing numpy.distutils.fcompiler ... ok ------ Checking availability of supported Fortran compilers: customize CompaqFCompiler customize NoneFCompiler customize AbsoftFCompiler Could not locate executable ifort Could not locate executable ifc Could not locate executable ifort Could not locate executable efort Could not locate executable efc customize IntelFCompiler Could not locate executable gfortran Could not locate executable f95 customize GnuFCompiler customize SunFCompiler customize VastFCompiler customize GnuFCompiler customize IbmFCompiler customize Gnu95FCompiler customize IntelVisualFCompiler customize G95FCompiler customize IntelItaniumFCompiler customize PGroupFCompiler customize LaheyFCompiler customize CompaqVisualFCompiler customize MipsFCompiler customize HPUXFCompiler customize IntelItaniumVisualFCompiler customize NAGFCompiler List of available Fortran compilers: --fcompiler=gnu GNU Fortran Compiler (3.4.4) List of unavailable Fortran compilers: --fcompiler=absoft Absoft Corp Fortran Compiler --fcompiler=compaq Compaq Fortran Compiler --fcompiler=compaqv DIGITAL|Compaq Visual Fortran Compiler --fcompiler=g95 GNU Fortran 95 Compiler --fcompiler=gnu95 GNU 95 Fortran Compiler --fcompiler=hpux HP Fortran 90 Compiler --fcompiler=ibm IBM XL Fortran Compiler --fcompiler=intel Intel Fortran Compiler for 32-bit apps --fcompiler=intele Intel Fortran Compiler for Itanium apps --fcompiler=intelev Intel Visual Fortran Compiler for Itanium apps --fcompiler=intelv Intel Visual Fortran Compiler for 32-bit apps --fcompiler=lahey Lahey/Fujitsu Fortran 95 Compiler --fcompiler=mips MIPSpro Fortran Compiler --fcompiler=nag NAGWare Fortran 95 Compiler --fcompiler=none Fake Fortran compiler --fcompiler=pg Portland Group Fortran Compiler --fcompiler=sun Sun|Forte Fortran 95 Compiler --fcompiler=vast Pacific-Sierra Research Fortran 90 Compiler List of unimplemented Fortran compilers: --fcompiler=f Fortran Company/NAG F Compiler For compiler details, run 'config_fc --verbose' setup command. ------ Importing numpy.distutils.cpuinfo ... ok ------ CPU information: getNCPUs has_3dnow has_3dnowext has_mmx has_sse has_sse2 is_64bit is_AMD is_Opteron ------