Linux compile questions for SciPy
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I am trying to compile SciPy for our Linux systems. I have been able to compile NumPy and ATLAS. These have been installed in user specified directories, /hpc/soft/NumPy and /hpc/soft/atlas, using the -prefix option. When I try to build SciPy it seems to be picking up an older version of numpy installed in the system directories. How do I point the SciPy build to look for the version I have compiled? OS SLES SP 1 uname -a Linux hpcp8002 2.6.32.12-0.7-default #1 SMP 2010-05-20 11:14:20 +0200 x86_64 x86_64 x86_64 GNU/Linux numpy version 1.6.1 **The version I compiled numpy version 1.3.0 **Version install in system directories scipy version 0.10.1 atlas version 3.9.74 python version 2.6 I have attached the screen output from the scipy build attempt. Any help would be appreciated. Thank you. Cindy <<scipy.build.log>>
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Am Di 08 Mai 2012 21:25:38 CEST schrieb Crooks, Cynthia J:
I am trying to compile SciPy for our Linux systems. I have been able to compile NumPy and ATLAS. These have been installed in user specified directories, /hpc/soft/NumPy and /hpc/soft/atlas, using the –prefix option. When I try to build SciPy it seems to be picking up an older version of numpy installed in the system directories. How do I point the SciPy build to look for the version I have compiled?
OS SLESSP 1
uname –a Linux hpcp8002 2.6.32.12-0.7-default #1 SMP 2010-05-20 11:14:20 +0200 x86_64 x86_64 x86_64 GNU/Linux
numpy version 1.6.1 **The version I compiled
numpy version 1.3.0 **Version install in system directories
scipy version 0.10.1
atlas version3.9.74
python version 2.6
I have attached the screen output from the scipy build attempt.
Any help would be appreciated. Thank you.
Cindy<<scipy.build.log>>
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Make sure your PYTHONPATH environment variable is set to include the site-packages folder from /hpc/soft/NumPy/ before the system-wide site-packages. Andreas.
participants (2)
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Andreas H.
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Crooks, Cynthia J