I cannot install SciPy without getting a number (15) of errors that all resolve to: File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' I can see no import errors. I have installed lapack, blas and atlas from source. The size of the lapack library is ~22M. I have imported the atlas optimised objects into the lapack.a. I have removed all other lapack shared libraries from my system. I have tried 'python setup.py clean' prior to every re-install. Can anyone suggest a way to resolve this? Outputs of the diagnostic runsare attached. (1-5, 6, 7 (part, there is no scipy_core/scipy_distutils/command/build_flib.py in the build)) Output of test (scipy.test(level=1)) follows. Regards, Andrew Lees. ...................................................................................................................Warning: 1000000 bytes requested, 20 bytes read. ......................../usr/lib/python2.3/site-packages/scipy/interpolate/fitpack2.py:412: UserWarning: The coefficients of the spline returned have been computed as the minimal norm least-squares solution of a (numerically) rank deficient system (deficiency=7). If deficiency is large, the results may be inaccurate. Deficiency may strongly depend on the value of eps. warnings.warn(message) ....................................................................................................E........................................................................................................................................................................................EEEE.................................E......EE....................E..........................EEE...........................EEE................................................................................................................................................................................................. ====================================================================== ERROR: check_assoc_laguerre (scipy.special.basic.test_basic.test_assoc_laguerre) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 532, in check_assoc_laguerre a1 = genlaguerre(11,1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 267, in genlaguerre x,w,mu0 = la_roots(n1,alpha,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 251, in la_roots val = gen_roots_and_weights(n,an_La,sbn_La,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_chebyc (scipy.special.basic.test_basic.test_chebyc) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 675, in check_chebyc C0 = chebyc(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 470, in chebyc x,w,mu0 = c_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 457, in c_roots [x,w,mu0] = j_roots(n,-0.5,-0.5,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_chebys (scipy.special.basic.test_basic.test_chebys) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 692, in check_chebys S0 = chebys(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 501, in chebys x,w,mu0 = s_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 488, in s_roots [x,w,mu0] = j_roots(n,0.5,0.5,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_chebyt (scipy.special.basic.test_basic.test_chebyt) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 709, in check_chebyt T1 = chebyt(1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 419, in chebyt x,w,mu = t_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 405, in t_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_chebyu (scipy.special.basic.test_basic.test_chebyu) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 725, in check_chebyu U1 = chebyu(1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 442, in chebyu base = jacobi(n,0.5,0.5,monic=monic) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 169, in jacobi x,w,mu = j_roots(n,alpha,beta,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_gegenbauer (scipy.special.basic.test_basic.test_gegenbauer) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1089, in check_gegenbauer Ca1 = gegenbauer(1,a) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 383, in gegenbauer base = jacobi(n,alpha-0.5,alpha-0.5,monic=monic) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 169, in jacobi x,w,mu = j_roots(n,alpha,beta,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_hermite (scipy.special.basic.test_basic.test_hermite) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1044, in check_hermite H0 = hermite(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 325, in hermite x,w,mu0 = h_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 312, in h_roots val = gen_roots_and_weights(n,an_H,sbn_H,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_hermitenorm (scipy.special.basic.test_basic.test_hermite) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1060, in check_hermitenorm H0 = hermitenorm(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 358, in hermitenorm x,w,mu0 = he_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 345, in he_roots val = gen_roots_and_weights(n,an_He,sbn_He,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_jacobi (scipy.special.basic.test_basic.test_jacobi) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1263, in check_jacobi P1 = jacobi(1,a,b) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 169, in jacobi x,w,mu = j_roots(n,alpha,beta,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_genlaguerre (scipy.special.basic.test_basic.test_laguerre) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1567, in check_genlaguerre lag0 = genlaguerre(0,k) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 267, in genlaguerre x,w,mu0 = la_roots(n1,alpha,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 251, in la_roots val = gen_roots_and_weights(n,an_La,sbn_La,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_laguerre (scipy.special.basic.test_basic.test_laguerre) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1552, in check_laguerre lag0 = laguerre(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 292, in laguerre x,w,mu0 = l_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 283, in l_roots return la_roots(n,0.0,mu=mu) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 251, in la_roots val = gen_roots_and_weights(n,an_La,sbn_La,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_legendre (scipy.special.basic.test_basic.test_legendre) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1581, in check_legendre leg0 = legendre(0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 569, in legendre x,w,mu0 = p_roots(n1,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 560, in p_roots return j_roots(n,0.0,0.0,mu=mu) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 155, in j_roots val = gen_roots_and_weights(n,an_J,sbn_J,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_sh_chebyu (scipy.special.basic.test_basic.test_sh_chebyu) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1855, in check_sh_chebyu Us1 = sh_chebyu(1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 547, in sh_chebyu base = sh_jacobi(n,2.0,1.5,monic=monic) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 228, in sh_jacobi x,w,mu0 = js_roots(n1,p,q,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 205, in js_roots val = gen_roots_and_weights(n,an_Js,sbn_Js,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_sh_jacobi (scipy.special.basic.test_basic.test_sh_jacobi) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1883, in check_sh_jacobi G1 = sh_jacobi(1,p,q) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 228, in sh_jacobi x,w,mu0 = js_roots(n1,p,q,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 205, in js_roots val = gen_roots_and_weights(n,an_Js,sbn_Js,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ====================================================================== ERROR: check_sh_legendre (scipy.special.basic.test_basic.test_sh_legendre) ---------------------------------------------------------------------- Traceback (most recent call last): File "/usr/lib/python2.3/site-packages/scipy/special/tests/test_basic.py", line 1806, in check_sh_legendre Ps1 = sh_legendre(1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 593, in sh_legendre x,w,mu0 = ps_roots(n,mu=1) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 584, in ps_roots return js_roots(n,1.0,1.0,mu=mu) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 205, in js_roots val = gen_roots_and_weights(n,an_Js,sbn_Js,mu0) File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 121, in gen_roots_and_weights eig = get_eig_func() File "/usr/lib/python2.3/site-packages/scipy/special/orthogonal.py", line 91, in get_eig_func eig = scipy.linalg.eig AttributeError: 'module' object has no attribute 'eig' ---------------------------------------------------------------------- Ran 743 tests in 1.381s FAILED (errors=15)

...

...