Hi Fethi,
You can also use paraview [1] instead of mayavi for postprocessing. Paraview is distributed in a self-containing package.
Regards, Vladimir
On 2016-05-03 09:35, Fethi Okyar wrote:
Dear group,
We are trying to adapt sfepy for mechanobiological tissue modeling at Yeditepe University, Istanbul.
We are primarily using the arch (linux-x64) platform for our work. Python 3.5 and 2.7.11 are already installed in our systems. Building and installing sfepy somehow worked, though without mayavi. I believe mayavi does not install as a result of version incompatibilities with vtk and python 2.7.
Is a virtual environment more suitable for sfepy, and what are the preferred versions of dependencies (python, vtk, and mayavi)?
Thanks,
Fethi
On Thursday, December 17, 2015 at 3:10:34 PM UTC+2, Robert Cimrman wrote:
Hi Nina, could you try mayavi 4.3? The version 4.4 is not compatible with sfepy for the moment (cf. [1]). r. [1] https://github.com/sfepy/sfepy/issues/292 <https://github.com/sfepy/sfepy/issues/292> On 12/16/2015 03:09 PM, Nina Halabi wrote: > Dear Robert > > I could overcome my previous problems of not having root privileges, so it > all worked up till the command: > > ./postproc.py cylinder.vtk > > > This echoed the below message: > > Exception > In > /home/gmh/.local/lib/python2.7/site-packages/mayavi-4.4.4.dev0-py2.7-linux-x86_64.egg/mayavi/sources/vtk_xml_file_reader.py:86 > AttributeError: 'AlgorithmOutput' object has no attribute 'point_data' (in > get_all_attributes) > > Traceback (most recent call last): > File > "/home/gmh/.local/lib/python2.7/site-packages/traits-4.6.0.dev354-py2.7-linux-x86_64.egg/traits/trait_notifiers.py", > line 340, in __call__ > self.handler( *args ) > File "/home/gmh/sfepy/sfepy/postprocess/dataset_manager.py", line 177, in > _dataset_changed > self._assign_attribute.input = value > File > "/home/gmh/.local/lib/python2.7/site-packages/traits-4.6.0.dev354-py2.7-linux-x86_64.egg/traits/trait_handlers.py", > line 104, in _read_only > name, class_of( object ) ) > TraitError: The 'input' trait of an AssignAttribute instance is 'read only'. > sfepy: point scalars t at [-0.05 -0.02 0. ] > sfepy: range: -2.00e+00 2.00e+00 l2 norm range: 1.06e-02 2.00e+00 > No handlers could be found for logger "mayavi.core.common" > > > I'm using Python 2.7.8 if that's relevant to the current issue. > > Thanks again > Cheers >-- You received this message because you are subscribed to the Google Groups "sfepy-devel" group. To unsubscribe from this group and stop receiving emails from it, send an email to sfepy-devel...@googlegroups.com mailto:sfepy-devel...@googlegroups.com. To post to this group, send email to sfepy...@googlegroups.com mailto:sfepy...@googlegroups.com. Visit this group at https://groups.google.com/group/sfepy-devel.