Hello sfepy!

I am having trouble installing sfepy on my M1 mac using pip – I am getting an error which I am struggling to decode – it seems to be suggesting I don’t have pytables installed, but I do…

joshuameggitt@joshuas-mbp-2 bin % pip3 install sfepy -v

Using pip 22.3.1 from /Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/pip (python 3.9)

Collecting sfepy

Using cached sfepy-2022.3.tar.gz (16.1 MB)

Running command pip subprocess to install build dependencies

Collecting setuptools<60.0

Using cached setuptools-59.8.0-py3-none-any.whl (952 kB)

Collecting wheel

Using cached wheel-0.38.4-py3-none-any.whl (36 kB)

Collecting Cython<3.0,>=0.29.30

Using cached Cython-0.29.32-py2.py3-none-any.whl (986 kB)

Collecting matplotlib

Using cached matplotlib-3.6.2-cp39-cp39-macosx_11_0_arm64.whl (7.2 MB)

Collecting meshio

Using cached meshio-5.3.4-py3-none-any.whl (167 kB)

Collecting oldest-supported-numpy

Using cached oldest_supported_numpy-2022.11.19-py3-none-any.whl (4.9 kB)

Collecting pyparsing

Using cached pyparsing-3.0.9-py3-none-any.whl (98 kB)

Collecting scipy

Using cached scipy-1.9.3-cp39-cp39-macosx_12_0_arm64.whl (28.6 MB)

Collecting tables

Using cached tables-3.7.0-cp39-cp39-macosx_10_9_universal2.whl

Collecting contourpy>=1.0.1

Using cached contourpy-1.0.6-cp39-cp39-macosx_11_0_arm64.whl (226 kB)

Collecting cycler>=0.10

Using cached cycler-0.11.0-py3-none-any.whl (6.4 kB)

Collecting fonttools>=4.22.0

Using cached fonttools-4.38.0-py3-none-any.whl (965 kB)

Collecting numpy>=1.19

Using cached numpy-1.23.5-cp39-cp39-macosx_11_0_arm64.whl (13.4 MB)

Collecting python-dateutil>=2.7

Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)

Collecting kiwisolver>=1.0.1

Using cached kiwisolver-1.4.4-cp39-cp39-macosx_11_0_arm64.whl (63 kB)

Collecting pillow>=6.2.0

Using cached Pillow-9.3.0-cp39-cp39-macosx_11_0_arm64.whl (2.9 MB)

Collecting packaging>=20.0

Using cached packaging-21.3-py3-none-any.whl (40 kB)

Collecting rich

Using cached rich-12.6.0-py3-none-any.whl (237 kB)

Collecting numpy>=1.19

Using cached numpy-1.21.0-cp39-cp39-macosx_11_0_arm64.whl (12.1 MB)

Collecting numexpr>=2.6.2

Using cached numexpr-2.8.4-cp39-cp39-macosx_11_0_arm64.whl (89 kB)

Collecting six>=1.5

Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)

Collecting pygments<3.0.0,>=2.6.0

Using cached Pygments-2.13.0-py3-none-any.whl (1.1 MB)

Collecting commonmark<0.10.0,>=0.9.0

Using cached commonmark-0.9.1-py2.py3-none-any.whl (51 kB)

Installing collected packages: commonmark, wheel, six, setuptools, pyparsing, pygments, pillow, numpy, kiwisolver, fonttools, Cython, cycler, scipy, rich, python-dateutil, packaging, oldest-supported-numpy, numexpr, contourpy, tables, meshio, matplotlib

ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.

nbconvert 7.1.0 requires jupyter-core>=4.7, which is not installed.

Successfully installed Cython-0.29.32 commonmark-0.9.1 contourpy-1.0.6 cycler-0.11.0 fonttools-4.38.0 kiwisolver-1.4.4 matplotlib-3.6.2 meshio-5.3.4 numexpr-2.8.4 numpy-1.21.0 oldest-supported-numpy-2022.11.19 packaging-21.3 pillow-9.3.0 pygments-2.13.0 pyparsing-3.0.9 python-dateutil-2.8.2 rich-12.6.0 scipy-1.9.3 setuptools-59.8.0 six-1.16.0 tables-3.7.0 wheel-0.38.4

Installing build dependencies ... done

Running command Getting requirements to build wheel

Traceback (most recent call last):

File "/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 351, in <module>

  main()

File "/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 333, in main

  json_out['return_val'] = hook(**hook_input['kwargs'])

File "/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py", line 118, in get_requires_for_build_wheel

  return hook(config_settings)

File "/private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-build-env-_zl19961/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 162, in get_requires_for_build_wheel

  return self._get_build_requires(

File "/private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-build-env-_zl19961/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 143, in _get_build_requires

  self.run_setup()

File "/private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-build-env-_zl19961/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 267, in run_setup

  super(_BuildMetaLegacyBackend,

File "/private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-build-env-_zl19961/overlay/lib/python3.9/site-packages/setuptools/build_meta.py", line 158, in run_setup

  exec(compile(code, __file__, 'exec'), locals())

File "setup.py", line 214, in <module>

  check_versions()

File "setup.py", line 106, in check_versions

  package_check('tables', INFO.PYTABLES_MIN_VERSION,

File "/private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-install-6wjrcx5t/sfepy_ed194f740f8244c08f12a5b98619886b/./tools/build_helpers.py", line 314, in package_check

  raise RuntimeError(msgs['missing'] % pkg_name)

RuntimeError: tables is missing

error: subprocess-exited-with-error

× Getting requirements to build wheel did not run successfully.

│ exit code: 1

╰─> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip.

full command: /Library/Frameworks/Python.framework/Versions/3.9/bin/python3 /Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/tmpbv5i16rb

cwd: /private/var/folders/2_/j_j8jwdd0kv41r_ny80h_lfw0000gn/T/pip-install-6wjrcx5t/sfepy_ed194f740f8244c08f12a5b98619886b

Getting requirements to build wheel ... error

error: subprocess-exited-with-error

× Getting requirements to build wheel did not run successfully.

│ exit code: 1

╰─> See above for output.

note: This error originates from a subprocess, and is likely not a problem with pip.

Any advice on what I could try to do to fix this issue would be greatly appreciated!

BR Josh

[University of Salford] Dr Joshua WR Meggitt Lecturer in Acoustical Engineering 1st Floor Newton Building, Room 105 University of Salford, Greater Manchester M5 4WT T: +44(0) 161 2955208 j.w.r.meggitt1@salford.ac.ukmailto:j.w.r.meggitt1@salford.ac.uk / www.salford.ac.ukhttp://www.salford.ac.uk/ [cid66978*image002.jpg@01D7EB5C.B9BEB240] Click here to book a personal tutoring appointment!https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Foutlook.office365.com%2Fowa%2Fcalendar%2FPersonaltutormeeting2%40edu.salford.ac.uk%2Fbookings%2F&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837668009%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=P4DHmwFpvZmrrM9R51qavm9MQ%2BoBmuwGVpHRDlpcKPk%3D&reserved=0

Researchgate: https://www.researchgate.net/profile/Joshua_Meggitthttps://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.researchgate.net%2Fprofile%2FJoshua_Meggitt&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=%2Fl7LMjtfoa57FCB1KvhiLq407za9owNMy6u5se0%2Byos%3D&reserved=0 Google Scholar: https://scholar.google.co.uk/citations?user=0KmpklkAAAAJ&hl=en&oi=sr...https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fscholar.google.co.uk%2Fcitations%3Fuser%3D0KmpklkAAAAJ%26hl%3Den%26oi%3Dsra&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=Qj%2FiXGGvyM1uD3YTTz%2BjY4ilQemTwNB%2FneNXx5RGGH4%3D&reserved=0 Orchid: https://orcid.org/0000-0002-6665-2939https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Forcid.org%2F0000-0002-6665-2939&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=aBTDgLTrW7KCIWLKPnikEZoYqQ%2F73VJeZ6kVC5bIRJg%3D&reserved=0 Latest Journal Articles: Interval sensitivity analysis of joint dynamics in complex built-up structures – JVC 2022https://journals.sagepub.com/doi/10.1177/10775463221113969 Interval-based identification of response-critical joints: A tool for model refinement – JSV 2022https://www.sciencedirect.com/science/article/pii/S0022460X22000979?via%3Dihub Generalised round-trip identity - For the determination of structural dynamic properties at locations inaccessible or too distant for direct measurement – JSV 2021https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdoi.org%2F10.1016%2Fj.jsv.2021.116325&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=Tl%2BJMKWJVcyKPHQ5L6WYE1rlx8SHnUMwlYowP%2F9zv%2Fk%3D&reserved=0 Vibro-acoustic analysis of a domestic product based on experimental measurement and hybrid modelling – AA 2021https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fdoi.org%2F10.1016%2Fj.apacoust.2021.108144&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=qjXlzvmjCrDOg3BfBuD8vth0%2FGuTac78tS68pQezgwU%3D&reserved=0 Component Replacement TPA: a transmissibility-based structural modification method for in-situ transfer path analysis – JSV 2021https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww-sciencedirect-com.salford.idm.oclc.org%2Fscience%2Farticle%2Fpii%2FS0022460X21000638%3Fvia%253Dihub&data=04%7C01%7CJ.W.R.Meggitt1%40salford.ac.uk%7C43f7e904d9fb43f53e8d08d9b8ae7d23%7C65b52940f4b641bd833d3033ecbcf6e1%7C0%7C0%7C637743881837824222%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C3000&sdata=Jd34PgFC4ncwpMUk3FPDAoOV17Nr0wVanZLN86i2CWY%3D&reserved=0