Also, please forgive some of the more cryptic code in the ART frontend, I know it isn't ideal. It'll be gutted, cleaned and streamlined for the yt geometry refactor.
chris
On Thursday, May 3, 2012, Matthew Turk wrote:
Chris submitted a pretty sizable pull request -- congrats, Chris! I
am going to review this, but I'd like to invite others to do so as
well.
---------- Forwarded message ----------
From: Christopher Moody <pullrequests-noreply@bitbucket.org>
Date: Thu, May 3, 2012 at 1:01 AM
Subject: [yt_analysis/yt] New ART frontend and new Sunrise export,
expanded Rockstar (pull request #150)
To: matthewturk@gmail.com
A new pull request has been opened by Christopher Moody.
juxtaposicion/yt has changes to be pulled into yt_analysis/yt.
https://bitbucket.org/yt_analysis/yt/pull-request/150/new-art-frontend-and-new-sunrise-export
Title: New ART frontend and new Sunrise export, expanded Rockstar
ART Frontend now uses Hilbert-patch coalescing a la the RAMSES
frontend. Particle support included.
Sunrise export is completely revamped, works with the new MPI Sunrise
and it's Hilbert-ordering convention.
Expanded some Rockstar options and expanded the HaloList class so that
we can plot 'HOP' circles for halos found via yt.
Changes to be pulled:
096be56abb5c by Christopher Moo…: "added back Msun to data_structures"
60d0eae312ac by Christopher Moo…: "reverted a lot of the last commit"
33e1017fc58a by Christopher Moo…: "something is wrong with the ART
frontend units"
1503e0ae9825 by Christopher Moo…: "hilbert frameworks works; wrong
ordering though"
db3a9b59d37c by Christopher Moo…: "merge"
42485223eca7 by Christopher Moo…: "fixes in rockstar halo classes.
allowing ART frontend to be dm only"
41bf558abeaf by Christopher Moo…: "merged"
629ca6b1128f by Christopher Moo…: "implemented rockstar halo and halo
list classes"
8512e594a837 by Christopher Moo…: "updated to tip"
6cc606a417a7 by Christopher Moo…: "more rockstar options. fixed ART
particle masses"
fecd8f0251c2 by Christopher Moo…: "removing pdb trace"
26ad4e98e6f7 by Christopher Moo…: "fixed particle positions to unitary units"
05d7dd36866a by Christopher Moo…: "fixes to ART particles"
eb9e749e7253 by Christopher Moo…: "added the ability to pass DM
particle mass directly"
c309f591b93f by Christopher Moo…: "added Rockstar halo class"
91a9d9d9e7d4 by Christopher Moo…: " merged with tip"
a3bc652df01e by Christopher Moo…: "changed le to le-1"
f42fa77f5077 by Christopher Moo…: "changed LE for ART. works!"
053ae2cf5a3a by Christopher Moo…: "fixed temp field. commented out child mask."
0834402f6cde by Christopher Moo…: "reorganized the hydro fields"
549c408579ef by Christopher Moo…: " fixed a bug with particle arrays
being the wrong length. affected stars."
4433494b6bba by Christopher Moo…: "implemented child masks. Broken!
causes a segfault"
761a9e79cf93 by Matthew Turk: "Making regridding more strict and
closer to what we want for the actual
selectio…"
d03f9f1da6f3 by Matthew Turk: "Adding a progressbar and a better
parentage calculator to the ART frontend."
12223d9fef86 by Christopher Moo…: "particle field definitions"
69fee55a453e by Christopher Moo…: "added a few more options to patch splitting"
a97c1ad2ec24 by Christopher Moo…: "fixed so that all fields are fully
loaded in on preload. previously, only up to …"
210c6d907441 by Christopher Moo…: "particle fields can be accessed"
895621adae33 by Christopher Moo…: "added time conversion to data_structure"
858542457124 by Christopher Moo…: "particle fields still not working."
9ee69e4f02cd by Christopher Moo…: "added standard le, active dim
attributes to art grids"
b33d607ce6ec by Christopher Moo…: "particles read in and indices
gridded. fields not setup yet."
e3a1f76ae1c5 by Christopher Moo…: "forced 32 bit numpy arrays for
IO-cython compatibility"
0fcc360c4d58 by Christopher Moo…: "first pass at particle inclusion.
change recursiv splitting to start from the mi…"
d202aaa72971 by Christopher Moo…: "including particle headers"
26eb767bac7f by Christopher Moo…: "bug fixes to io. added new
parameters and units to data structures."
98534589dd52 by Christopher Moo…: "new io is less memory intensive.
seems to work too."
a1e85e8f0816 by Christopher Moo…: " reduced memory"
dd43dbad7df5 by Christopher Moo…: " working version of art reader.
faster than the first pass, uses matt's hilbert …"
4c7fcdbca996 by Christopher Moo…: "bug fixes in the info messages"
b1cb776fed6f by Christopher Moo…: "adding log info. starting on memory
optimization; loading left edges by level."
d4d82426e66c by Christopher Moo…: "fixed a bug in the hilbert grad
patching a bit. added lots of comments."
ca8b7105e354 by Christopher Moo…: "implemented matt's hilbert-ordered
patch-splitting"
8ae85483aad1 by Christopher Moo…: "fixing root grid size. projection
of Ones field works."
41c966d5bcdc by Christopher Moo…: "record arrays overflow silently.
changed the numgrid calculation to 64bit."
45c690fab939 by Christopher Moo…: "special exception for the root grid"
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