Re: [yt-dev] Issue #581: Source install error from fKDpy (yt_analysis/yt)

I'm going to pull it in ASAP, and I'll close it when I do. Sorry about the trouble. I'll do another big merge after 3.0a2 comes out. On Wed, May 29, 2013 at 5:48 PM, Casey W. Stark wrote:

Should I close the issue or leave it open until this is pulled into 3.0?

On Wed, May 29, 2013 at 2:39 PM, Nathan Goldbaum wrote:

...

I left a comment on the bitbucket issue - the bug is fixed in 2.X but not fixed in 3.0.

On May 29, 2013, at 2:36 PM, Anthony Scopatz wrote:

Hello All,

I have seen this issue before, but I forget what fixed it. What version of Python are you using? Module shared objects get different names in Python 3. This file would be called something like fKDpy.cpython.so instead, which is why setup.py would not find it. Try a clean rebuild using Python 2.

Be Well Anthony

On Wed, May 29, 2013 at 4:25 PM, Casey Stark wrote:

...

New issue 581: Source install error from fKDpy

https://bitbucket.org/yt_analysis/yt/issue/581/source-install-error-from-fkd...

Casey Stark:

I'm installing yt-3.0 on NERSC's hopper following the instructions on http://www.nersc.gov/users/software/development-tools/python-tools/. The install fails because the setup script first decides not to build fKDpy.so, but then later tries to copy it to the build directory. Here are the pieces of the log:

``` $ python setup.py install --home=~/python_modules/hopper PNG_LOCATION: png found in: /usr/include, /usr/lib FTYPE_LOCATION: freetype found in: /usr/include, /usr/lib HDF5_LOCATION: HDF5_DIR: /opt/cray/hdf5/1.8.8/gnu/47/include, /opt/cray/hdf5/1.8.8/gnu/47/lib running install running bdist_egg running egg_info running build_src running build_forthon fKDpy.so won't be built due to missing Forthon/gfortran build_src ... running install_data error: can't copy 'yt/utilities/kdtree/fKDpy.so': doesn't exist or not a regular file ```

Am I missing something here?

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