You might also check out the Ubuntu PPAs that Mike Kuhlen set up. The PPA
method is described at the bottom of the 'Get yt' section of the yt
website: http://yt-project.org/#getyt
I've never used Mike's PPA myself, though, so I can't speak to the state of
it at the moment.
On Mon, Feb 18, 2013 at 12:49 PM, Nathan Goldbaum
Hi Roberto,
Sorry my advice didn't help. It's possible that reinstalling Cython will fix the issue, although if you already have Cython 0.17.1 installed it's probably fine as is.
One possible way around this would be to install yt using the install script. We've recently added the option to have the install script build isolated LAPACK and BLAS installations which scipy can link against. The option is turned on by setting INST_SCIPY=1 in the install script.
Again, sorry I can't be of more assistance, I'm not sure what's going wrong in your case.
-Nathan
On Sun, Feb 17, 2013 at 3:58 PM, trobolo dinni < trobolo.trobolo.dinni5@gmail.com> wrote:
Hi Nathan,
sorry for the delay in replying.
To install yt on the system python I followed the procedure you mentioned: entered the yt directory cloned from bitbucket, run "python setup.py install". I did that again to check another time but the error persists.
As I said I just reinstalled the same Ubuntu version on the same computer where before yt was usually installed by following the procedure above and it was normally running.
Could reinstall cython help to solve the problem?
Thanks, Roberto
On 14 February 2013 17:57, Nathan Goldbaum
wrote: Hi Trobolo,
data_point_utilities is a c extension that gets auto generated from a cython file and then compiled into a shared library when you run the yt setup script:
$ cd $YT_HG $ python setup.py install
Here $YT_HG is the directory containing the yt source code repository you cloned from bitbucket.
Please let us know if you continue to have difficulties installing yt after running the setup script.
Cheers,
Nathan
On Feb 13, 2013, at 10:49 PM, trobolo dinni < trobolo.trobolo.dinni5@gmail.com> wrote:
Dear yt users,
I usually install yt on system python, following the procedure suggested me in this mailing list some months ago. In general everything goes fine with the installation and I can normally use yt.
Now I installed Ubuntu from scratch in my computer (where previously yt was installed and running!) and the installation seems to fine, but when I insert the command "from yt.mods import * ", I get the following error:
---------------------------------------------------------------------------
ImportError Traceback (most recent call last)
/usr/local/lib/python2.7/dist-packages/yt/<ipython console> in <module>()
/usr/local/lib/python2.7/dist-packages/yt/yt/mods.py in <module>() 56 np.seterr(all = 'ignore') 57 ---> 58 from yt.data_objects.api import \ 59 BinnedProfile1D, BinnedProfile2D, BinnedProfile3D, \ 60 data_object_registry, \
/usr/local/lib/python2.7/dist-packages/yt/yt/data_objects/api.py in <module>() 29 """ 30 ---> 31 from grid_patch import \ 32 AMRGridPatch 33
/usr/local/lib/python2.7/dist-packages/yt/yt/data_objects/grid_patch.py in <module>()
33 from yt.utilities.definitions import x_dict, y_dict 34 ---> 35 from yt.data_objects.data_containers import YTFieldData 36 from yt.utilities.definitions import x_dict, y_dict 37 from .field_info_container import \
/usr/local/lib/python2.7/dist-packages/yt/yt/data_objects/data_containers.py in <module>()
41 from yt.config import ytcfg 42 ---> 43 from yt.data_objects.derived_quantities import
GridChildMaskWrapper
44 from yt.data_objects.particle_io import
particle_handler_registry
45 from yt.utilities.lib import find_grids_in_inclined_box, \
/usr/local/lib/python2.7/dist-packages/yt/yt/data_objects/derived_quantities.py in <module>()
33 from yt.data_objects.field_info_container import \ 34 FieldDetector ---> 35 from yt.utilities.data_point_utilities import FindBindingEnergy 36 from yt.utilities.parallel_tools.parallel_analysis_interface
import \
37 ParallelAnalysisInterface
ImportError: No module named data_point_utilities
I would like to ask if someone has an idea of how can I solve this
problem.
Thanks, Roberto
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