Re: [yt-users] New yt installation problem

Hi Abhijit, This looks just like incompatible IPython upgrades, or something along those lines. If you move the ~/.ipython directory out of the way, it will re-initialize the default shell scripts, and that should be clear -- I'd suggest "mv ~/.ipython ~/.ipython_old" and then that might work. Otherwise, I think things should still work, independent of the IPython installation. :) Best, Matt On Tue, Jun 29, 2010 at 8:24 AM, Dr. ABHIJIT BHATTACHARYYA wrote:

Hi Matt I did it. Now the error is different and I am pasting the warning message. Best Abhijit

...

iyt Your PyGtk has set_interactive(), so you can use the more stable single-threaded Gtk mode. See https://bugs.launchpad.net/ipython/+bug/270856 System command list not initialized, probably the first run... running %rehashx to refresh the command list. Run %rehashx again to refresh command list (after installing new software etc.)

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AttributeError                            Traceback (most recent call last) /usr/local/lib/python2.6/site-packages/IPython/ipmaker.pyc in force_import(modname, force_reload)      61         reload(sys.modules[modname])      62     else: ---> 63         __import__(modname)      64      65 /home/vega/.ipython/ipy_user_conf.py in <module>()     112     ip.ex('execfile("%s")' % os.path.expanduser(fname))     113 --> 114 main()     115     116 /home/vega/.ipython/ipy_user_conf.py in main()      31     # uncomment if you want to get ipython -p sh behaviour      32     # without having to use command line switches ---> 33     import ipy_profile_sh      34      35     # Configure your favourite editor? /usr/local/lib/python2.6/site-packages/IPython/Extensions/ipy_profile_sh.py in <module>()     268     ip.IP.runlines = _runlines     269 --> 270 main()     271     272 /usr/local/lib/python2.6/site-packages/IPython/Extensions/ipy_profile_sh.py in main()     131     132     ip.set_hook('input_prefilter', slash_prefilter_f) --> 133     extend_shell_behavior(ip)     134     135 class LastArgFinder: /usr/local/lib/python2.6/site-packages/IPython/Extensions/ipy_profile_sh.py in extend_shell_behavior(ip)     172     ip.IP.__sig__ = 0xa005     173     # mark the IPSHELL with this signature --> 174     ip.IP.user_ns['__builtins__'].__dict__['__sig__'] = ip.IP.__sig__     175     176     from IPython.Itpl import ItplNS AttributeError: 'dict' object has no attribute '__dict__' WARNING: Loading of ipy_user_conf failed.

Welcome to yt! [~/.ipython]|1>

________________________________ From: Matthew Turk To: Discussion of the yt analysis package Sent: Tue, 29 June, 2010 8:44:54 PM Subject: Re: [yt-users] New yt installation problem

Hi Abhijit,

If you remove a single space from the front of line 33, which currently has 5 spaces, so that it only has 4, it should work.  This is the line that says "import ipy_profile_sh".

Best,

Matt

On Tue, Jun 29, 2010 at 7:58 AM, Dr. ABHIJIT BHATTACHARYYA wrote:

...

Hi Matt, Here is the ipy_user_conf file. Best Abhijit

________________________________ From: Matthew Turk To: Discussion of the yt analysis package Sent: Mon, 28 June, 2010 2:44:31 AM Subject: Re: [yt-users] New yt installation problem

Hi Abhijit,

Sorry to hear that upgrade didn't work; very puzzling.  Glad to hear, however, that the fresh install worked for you!  The error with ipy_user_conf.py is confusing.  That's a file that should ship with IPython, and which we don't make any modifications to.  Could you post a slightly longer excerpt?  It seems that the issue might be with the level of indentation.  Or, even attach ~/.ipython/ipy_user_conf.py?

Thanks,

Matt

On Sun, Jun 27, 2010 at 1:24 PM, Dr. ABHIJIT BHATTACHARYYA wrote:

...

Hi

After failure with the canonical install script I foloowed instruction for the manual installation procedure. This method gave me success. However, invoking the "iyt" gives me following warning (seems not a clean run). The good news is that ignoring this warning, I could plot Enzo data using pylab.plot. Here one important point I noticed is that, in earlier version, I had to use pylab.show() command to plot on the screen after declaration of pylab.xlabel, pylab.ylabel and pylab.plot commands. Here, as soon as I use pylab.xlabel, I find graphics window on the screen which adpts all the subsequient command and hence do not require any pylab.show().

For the warning, I checked all path is given in .cshrc. In ~/.ipython/ipy_user_conf.py file, the problem is given by "o = ip.options" line. Any handle? regs Abhijit

...

iyt Your PyGtk has set_interactive(), so you can use the more stable single-threaded Gtk mode. See https://bugs.launchpad.net/ipython/+bug/270856

--------------------------------------------------------------------------- IndentationError                          Traceback (most recent call last)

/usr/local/lib/python2.6/site-packages/IPython/ipmaker.pyc in force_import(modname, force_reload)      61         reload(sys.modules[modname])      62     else: ---> 63         __import__(modname)      64      65

IndentationError: unindent does not match any outer indentation level (ipy_user_conf.py, line 52) WARNING: Loading of ipy_user_conf failed.

Welcome to yt!

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