On Mon, Apr 4, 2016 at 10:18 AM, Kacper Kowalik
On 04/04/2016 10:09 AM, Kacper Kowalik wrote:
On 04/04/2016 09:59 AM, Andrew James Emerick wrote:
Hi everyone,
I'm letting anaconda handle my yt install. I have a workstation with yt 3.2.3 running that is now unable to load any enzo data set I have... it crashes with the following error when trying to access the data (and crashes with a call to "ds.field_list" with the same error):
http://paste.yt-project.org/show/6387/
However, this doesn't seem to be a problem on my laptop which I haven't updated (yt 3.2.2) and also isn't a problem on FLASH data I have.
Anyone have the same problem?
Hi Andrew, this is an issue caused by numpy>1.10. It's already fixed in yt repository [1]. However, a new version of yt hasn't been released yet.
You can either: apply that patch manually to yt-3.2.3, or postpone upgrading a bit. There should be a new release in a near future.
Cheers, Kacper
[1]
https://bitbucket.org/yt_analysis/yt/pull-requests/1697/cast-enzo-grid-start...
Hi again! Nathan just pointed out on slack two things: 1) that fix was backported to stable branch and *was* released with 3.2.3 2) your traceback suggests that you're not using yt installed by conda, but rather a source installation.
If you want to use yt that comes with conda could make sure that: 1) your PYTHONPATH is empty or unset 2) you're using proper version of python, export PATH=
/bin:$PATH should take care of that.
You might also need to do: $ pip uninstall yt $ conda uninstall yt repeatedly, until (possibly) multiple installations are removed. Then: $ conda install yt Python packaging is fun! -Nathan
If you want to use yt from source, could you make sure that: 1) you're on right revision: hg update yt-3.2.3 2) recompile source: python setup.py build_ext -i
Cheers, Kacper
Thanks, Andrew
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