Dear all,
I am trying to visualize the density slices of my simulation output at different red-shift. But the output files (RedshiftOutput0010_Slice_z_Density.png to RedshiftOutput0058_Slice_z_Density.png) are density color coded differently. My problem is how to make the density color code scale common for all.
Hi Reju, You can set plot limits with the following command. For further details have a look at documentation.
p.set_zlim(5, 1e2)
http://yt-project.org/doc/cookbook/complex_plots.html
I hope it helps. Cheers Latif
On Mon, Aug 5, 2013 at 1:45 PM, Reju Sam John rejusamjohn@gmail.com wrote:
Dear all,
I am trying to visualize the density slices of my simulation output at different red-shift. But the output files (RedshiftOutput0010_Slice_z_Density.png to RedshiftOutput0058_Slice_z_Density.png) are density color coded differently. My problem is how to make the density color code scale common for all.
-- Reju Sam John
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Dear Latif,
I have done the modification. it is giving the following error.
Traceback (most recent call last): File "slice_plot_const_density_scle.py", line 11, in <module> slc.set_zlim(5e-31,1e-29) File "/data1/pdf/csurajit/yt-x86_64/src/yt-hg/yt/visualization/plot_window.py", line 99, in newfunc rv = f(*args, **kwargs) TypeError: set_zlim() takes at least 4 arguments (3 given)
what are the other arguments i have to give.
my script is this...
from yt.mods import * file1="/app/run/csarkar/surajit/simulation_shock/simulation5/RD00" file2="/RedshiftOutput00" for kk in range(10, 67): fn_i=str(kk) fn=file1+fn_i+file2+fn_i # parameter file to load print fn pf = load(fn) # load data slc = SlicePlot(pf, 'z', ['Density'], center=[0.5,0.5,0.5], width=(128,'mpc')) slc.set_zlim(5e-31,1e-29) #slc.SlicePlot.set_zlim(10e-31,10e-26, nticks = 6) #slc.set_zlim(10e-31,10e-26, nticks = 6) slc.save()
On Mon, Aug 5, 2013 at 5:46 PM, Latif latifne@gmail.com wrote:
Hi Reju, You can set plot limits with the following command. For further details have a look at documentation.
p.set_zlim(5, 1e2)
http://yt-project.org/doc/cookbook/complex_plots.html
I hope it helps. Cheers Latif
On Mon, Aug 5, 2013 at 1:45 PM, Reju Sam John rejusamjohn@gmail.comwrote:
Dear all,
I am trying to visualize the density slices of my simulation output at different red-shift. But the output files (RedshiftOutput0010_Slice_z_Density.png to RedshiftOutput0058_Slice_z_Density.png) are density color coded differently. My problem is how to make the density color code scale common for all.
-- Reju Sam John
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Hi Reju,
what are the other arguments i have to give.
I believe another argument which should be provided is the variable name you would like to control, say, change
slc.set_zlim(5e-31,1e-29)
to:
slc.set_zlim('Density', 5e-31, 1e-29)
This helps if you have multiple variable to plot in the same figure and want to control them separately.
Best wishes, Suoqing
On Aug 5, 2013, at 8:31 PM, Reju Sam John rejusamjohn@gmail.com wrote:
Dear Latif,
I have done the modification. it is giving the following error.
Traceback (most recent call last): File "slice_plot_const_density_scle.py", line 11, in <module> slc.set_zlim(5e-31,1e-29) File "/data1/pdf/csurajit/yt-x86_64/src/yt-hg/yt/visualization/plot_window.py", line 99, in newfunc rv = f(*args, **kwargs) TypeError: set_zlim() takes at least 4 arguments (3 given)
what are the other arguments i have to give.
my script is this...
from yt.mods import * file1="/app/run/csarkar/surajit/simulation_shock/simulation5/RD00" file2="/RedshiftOutput00" for kk in range(10, 67): fn_i=str(kk) fn=file1+fn_i+file2+fn_i # parameter file to load print fn pf = load(fn) # load data slc = SlicePlot(pf, 'z', ['Density'], center=[0.5,0.5,0.5], width=(128,'mpc')) slc.set_zlim(5e-31,1e-29) #slc.SlicePlot.set_zlim(10e-31,10e-26, nticks = 6) #slc.set_zlim(10e-31,10e-26, nticks = 6) slc.save()
On Mon, Aug 5, 2013 at 5:46 PM, Latif latifne@gmail.com wrote: Hi Reju, You can set plot limits with the following command. For further details have a look at documentation.
p.set_zlim(5, 1e2)
http://yt-project.org/doc/cookbook/complex_plots.html
I hope it helps. Cheers Latif
On Mon, Aug 5, 2013 at 1:45 PM, Reju Sam John rejusamjohn@gmail.com wrote: Dear all,
I am trying to visualize the density slices of my simulation output at different red-shift. But the output files (RedshiftOutput0010_Slice_z_Density.png to RedshiftOutput0058_Slice_z_Density.png) are density color coded differently. My problem is how to make the density color code scale common for all.
-- Reju Sam John
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Reju Sam John _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Dear Suoqing JI,
Now its working... Thank you very much...
On Mon, Aug 5, 2013 at 6:18 PM, Suoqing JI jisuoqing@gmail.com wrote:
Hi Reju,
what are the other arguments i have to give.
I believe another argument which should be provided is the variable name you would like to control, say, change
slc.set_zlim(5e-31,1e-29)to:
slc.set_zlim('Density', 5e-31, 1e-29)
This helps if you have multiple variable to plot in the same figure and want to control them separately.
Best wishes, Suoqing
On Aug 5, 2013, at 8:31 PM, Reju Sam John rejusamjohn@gmail.com wrote:
Dear Latif,
I have done the modification. it is giving the following error.
Traceback (most recent call last): File "slice_plot_const_density_scle.py", line 11, in <module> slc.set_zlim(5e-31,1e-29) File "/data1/pdf/csurajit/yt-x86_64/src/yt-hg/yt/visualization/plot_window.py", line 99, in newfunc rv = f(*args, **kwargs) TypeError: set_zlim() takes at least 4 arguments (3 given)
what are the other arguments i have to give.
my script is this...
from yt.mods import * file1="/app/run/csarkar/surajit/simulation_shock/simulation5/RD00" file2="/RedshiftOutput00" for kk in range(10, 67): fn_i=str(kk) fn=file1+fn_i+file2+fn_i # parameter file to load print fn pf = load(fn) # load data slc = SlicePlot(pf, 'z', ['Density'], center=[0.5,0.5,0.5], width=(128,'mpc')) slc.set_zlim(5e-31,1e-29) #slc.SlicePlot.set_zlim(10e-31,10e-26, nticks = 6) #slc.set_zlim(10e-31,10e-26, nticks = 6) slc.save()
On Mon, Aug 5, 2013 at 5:46 PM, Latif latifne@gmail.com wrote:
Hi Reju, You can set plot limits with the following command. For further details have a look at documentation.
p.set_zlim(5, 1e2)
http://yt-project.org/doc/cookbook/complex_plots.html
I hope it helps. Cheers Latif
On Mon, Aug 5, 2013 at 1:45 PM, Reju Sam John rejusamjohn@gmail.comwrote:
Dear all,
I am trying to visualize the density slices of my simulation output at different red-shift. But the output files (RedshiftOutput0010_Slice_z_Density.png to RedshiftOutput0058_Slice_z_Density.png) are density color coded differently. My problem is how to make the density color code scale common for all.
-- Reju Sam John
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Reju Sam John _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-
Latif -
Reju Sam John -
Suoqing JI