Hey everyone, I'm having issues using yt on a fresh install of snow leopard. The 10.6 yt installation went perfect, but when I go to run a simple slice script, I'm getting this error: yt INFO 2010-06-15 20:16:15,452 Created plot collection with default plot-center = [1.0, 0.5, 0.0] Traceback (most recent call last): File "slices2D.py", line 9, in <module> p = pc.add_slice("Temperature",axis) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/plot_collection.py", line 372, in add_slice size=fig_size, periodic=periodic)) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 314, in __init__ self.__init_temp_image(use_colorbar) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 347, in __init_temp_image shrink=0.95) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/figure.py", line 1045, in colorbar cb = cbar.Colorbar(cax, mappable, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 647, in __init__ ColorbarBase.__init__(self, ax, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 238, in __init__ self.draw_all() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 249, in draw_all self._config_axes(X, Y) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 276, in _config_axes ticks, ticklabels, offset_string = self._ticker() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 415, in _ticker b = np.array(locator()) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/ticker.py", line 1069, in __call__ vmin = self.axis.get_minpos() AttributeError: DummyAxis instance has no attribute 'get_minpos' It seemed to me an issue with matplotlib, but I've tried many things including installing matplotlib from source separate from the yt installation, and it still fails. Any ideas? Thanks for your time and effort! Nicholas Earl
Hi Nicholas, Searching through my email history, it looks like a couple people were having this error back in September, but it didn't make it to the list. I don't quite know what the deal is. Can you try changing line 335 in /Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py from: temparray = na.ones(self.size) to: temparray = na.random.random(self.size) and try again? -Matt On Tue, Jun 15, 2010 at 5:48 PM, Nicholas Earl <earlnich@msu.edu> wrote:
Hey everyone, I'm having issues using yt on a fresh install of snow leopard. The 10.6 yt installation went perfect, but when I go to run a simple slice script, I'm getting this error:
yt INFO 2010-06-15 20:16:15,452 Created plot collection with default plot-center = [1.0, 0.5, 0.0] Traceback (most recent call last): File "slices2D.py", line 9, in <module> p = pc.add_slice("Temperature",axis) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/plot_collection.py", line 372, in add_slice size=fig_size, periodic=periodic)) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 314, in __init__ self.__init_temp_image(use_colorbar) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 347, in __init_temp_image shrink=0.95) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/figure.py", line 1045, in colorbar cb = cbar.Colorbar(cax, mappable, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 647, in __init__ ColorbarBase.__init__(self, ax, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 238, in __init__ self.draw_all() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 249, in draw_all self._config_axes(X, Y) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 276, in _config_axes ticks, ticklabels, offset_string = self._ticker() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 415, in _ticker b = np.array(locator()) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/ticker.py", line 1069, in __call__ vmin = self.axis.get_minpos() AttributeError: DummyAxis instance has no attribute 'get_minpos'
It seemed to me an issue with matplotlib, but I've tried many things including installing matplotlib from source separate from the yt installation, and it still fails. Any ideas? Thanks for your time and effort! Nicholas Earl _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Hmm, I get a bus error followed by a notification that Python had quit unexpectedly. Thanks, Nick On Jun 15, 2010, at 9:05 PM, Matthew Turk wrote:
Hi Nicholas,
Searching through my email history, it looks like a couple people were having this error back in September, but it didn't make it to the list. I don't quite know what the deal is. Can you try changing line 335 in /Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py from:
temparray = na.ones(self.size)
to:
temparray = na.random.random(self.size)
and try again?
-Matt
On Tue, Jun 15, 2010 at 5:48 PM, Nicholas Earl <earlnich@msu.edu> wrote:
Hey everyone, I'm having issues using yt on a fresh install of snow leopard. The 10.6 yt installation went perfect, but when I go to run a simple slice script, I'm getting this error:
yt INFO 2010-06-15 20:16:15,452 Created plot collection with default plot-center = [1.0, 0.5, 0.0] Traceback (most recent call last): File "slices2D.py", line 9, in <module> p = pc.add_slice("Temperature",axis) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/plot_collection.py", line 372, in add_slice size=fig_size, periodic=periodic)) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 314, in __init__ self.__init_temp_image(use_colorbar) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 347, in __init_temp_image shrink=0.95) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/figure.py", line 1045, in colorbar cb = cbar.Colorbar(cax, mappable, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 647, in __init__ ColorbarBase.__init__(self, ax, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 238, in __init__ self.draw_all() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 249, in draw_all self._config_axes(X, Y) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 276, in _config_axes ticks, ticklabels, offset_string = self._ticker() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 415, in _ticker b = np.array(locator()) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/ticker.py", line 1069, in __call__ vmin = self.axis.get_minpos() AttributeError: DummyAxis instance has no attribute 'get_minpos'
It seemed to me an issue with matplotlib, but I've tried many things including installing matplotlib from source separate from the yt installation, and it still fails. Any ideas? Thanks for your time and effort! Nicholas Earl _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Hi Nick, Weird. Could you manually remove /Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/ and then install from the matplotlib distribution that's in: /Users/earln/yt-i386/src/ and try again? If this doesn't work, I'll contact you off-list with some more detailed debugging info. I'm sure that the bus error is related to package mismatches, which probably comes down to being my fault somewhere... :) -Matt On Tue, Jun 15, 2010 at 6:20 PM, Nicholas Earl <earlnich@msu.edu> wrote:
Hmm, I get a bus error followed by a notification that Python had quit unexpectedly.
Thanks, Nick
On Jun 15, 2010, at 9:05 PM, Matthew Turk wrote:
Hi Nicholas,
Searching through my email history, it looks like a couple people were having this error back in September, but it didn't make it to the list. I don't quite know what the deal is. Can you try changing line 335 in /Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py from:
temparray = na.ones(self.size)
to:
temparray = na.random.random(self.size)
and try again?
-Matt
On Tue, Jun 15, 2010 at 5:48 PM, Nicholas Earl <earlnich@msu.edu> wrote:
Hey everyone, I'm having issues using yt on a fresh install of snow leopard. The 10.6 yt installation went perfect, but when I go to run a simple slice script, I'm getting this error:
yt INFO 2010-06-15 20:16:15,452 Created plot collection with default plot-center = [1.0, 0.5, 0.0] Traceback (most recent call last): File "slices2D.py", line 9, in <module> p = pc.add_slice("Temperature",axis) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/plot_collection.py", line 372, in add_slice size=fig_size, periodic=periodic)) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 314, in __init__ self.__init_temp_image(use_colorbar) File "/Users/earln/yt-i386/src/yt-trunk-svn/yt/raven/PlotTypes.py", line 347, in __init_temp_image shrink=0.95) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/figure.py", line 1045, in colorbar cb = cbar.Colorbar(cax, mappable, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 647, in __init__ ColorbarBase.__init__(self, ax, **kw) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 238, in __init__ self.draw_all() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 249, in draw_all self._config_axes(X, Y) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 276, in _config_axes ticks, ticklabels, offset_string = self._ticker() File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/colorbar.py", line 415, in _ticker b = np.array(locator()) File "/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/site-packages/matplotlib/ticker.py", line 1069, in __call__ vmin = self.axis.get_minpos() AttributeError: DummyAxis instance has no attribute 'get_minpos'
It seemed to me an issue with matplotlib, but I've tried many things including installing matplotlib from source separate from the yt installation, and it still fails. Any ideas? Thanks for your time and effort! Nicholas Earl _______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
participants (2)
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Matthew Turk -
Nicholas Earl