Hi, I'm trying to install the latest stable yt version via the install_script.sh on a Red Hat 6 based HPC. I'm getting a very confusing error during the final steps of the installation, which can be seen here: http://paste.yt-project.org/show/4612/ Basically, during the step where yt updates from the repo and then attempts to install, it looks in a very odd place for the distribute python package. I can't simply update that version, because I'm on an HPC, but I think the problem is deeper than that. Its looking for it in a version of python that I don't even have loaded in my environment, in a directory that isn't in my PYTHONPATH. I've tried wiping out my python path prior to install as well, but with the same results. From my understanding, yt shouldn't even be trying to use the system version of python any way? Any help would be much appreciated! Kaylea
Hi Kaylea,
Wow! That's super weird. Would you mind having another go, wiping
the yt-x86_64 directory, and trying the "bleeding edge" install
script? I'm wondering if one of the updates there -- maybe to SSL or
something -- would fix it. Indeed, it shouldn't be using the system
python...
-Matt
On Mon, May 12, 2014 at 1:29 PM, Kaylea Nelson
Hi,
I'm trying to install the latest stable yt version via the install_script.sh on a Red Hat 6 based HPC. I'm getting a very confusing error during the final steps of the installation, which can be seen here: http://paste.yt-project.org/show/4612/
Basically, during the step where yt updates from the repo and then attempts to install, it looks in a very odd place for the distribute python package. I can't simply update that version, because I'm on an HPC, but I think the problem is deeper than that. Its looking for it in a version of python that I don't even have loaded in my environment, in a directory that isn't in my PYTHONPATH. I've tried wiping out my python path prior to install as well, but with the same results. From my understanding, yt shouldn't even be trying to use the system version of python any way?
Any help would be much appreciated!
Kaylea
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Hi Matt,
Thanks for getting back to me.
I tried installing the bleeding edge version and am getting the following
failure. It seems like YT_DIR isn't getting set? I don't have this problem
with the stable version.
[hit enter]
Awesome! Here we go.
Using wget
Using sha512sum
Downloading xray_emissivity.h5 from yt-project.org
Setting YT_DIR=
Installing distribute
********************************************
FAILURE REPORT:
********************************************
make[1]: Leaving directory
`/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
make: *** [install-recursive] Error 1
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/bin/python2.7:
can't open file '/distribute_setup.py': [Errno 2] No such file or directory
********************************************
********************************************
Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
On a related note, whenever I install either version, the install also
fails when installing ZeroMQ:
Installing mercurial-3.0
Setting
YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
Installing distribute
Installing pip
Installing numpy-1.7.1
Installing matplotlib-1.3.0
Installing ZeroMQ
********************************************
FAILURE REPORT:
********************************************
CXX libzmq_la-ipc_address.lo
CXX libzmq_la-ipc_connecter.lo
stream_engine.hpp(97): error #82: storage class is not first
const static size_t greeting_size = 12;
^
compilation aborted for ipc_connecter.cpp (code 2)
make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1
make[1]: Leaving directory
`/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
make: *** [install-recursive] Error 1
********************************************
********************************************
Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
But I just fix the const static to static const in stream_engine.hpp and it
gets past that particular error (in the stable version anyway). Let me know
if I shouldn't be messing with that.
Actually, it appears to get YT_DIR the correctly the first time through,
but when I restart it after fixing the ZeroMQ bug, it fails to set YT_DIR.
So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
(as it was set the first time). If I do this, it gets past the above error
and I ultimately get the same error as for the stable version (the original
reason of this email):
[hit enter]
Awesome! Here we go.
Using wget
Using sha512sum
Downloading xray_emissivity.h5 from yt-project.org
Installing distribute
Installing pip
Installing ZeroMQ
Installing pyzmq-13.1.0 (arguments:
'--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64')
Installing tornado-3.1
Installing ipython-1.1.0
Installing h5py-2.1.3
Installing Cython-0.19.1
Installing Forthon-0.8.11
Installing nose-1.3.0
Installing python-hglib-1.0
Installing sympy-0.7.3
Doing yt update, wiping local changes and updating to branch yt-3.0
Installing yt
********************************************
FAILURE REPORT:
********************************************
pulling from https://bitbucket.org/yt_analysis/yt/
searching for changes
no changes found
0 files updated, 0 files merged, 0 files removed, 0 files unresolved
The required version of distribute (>=0.6.32) is not available,
and can't be installed while this script is running. Please
install a more recent version first, using
'easy_install -U distribute'.
(Currently using distribute 0.6.21
(/lustre/home/client/apps/fas/Langs/Python/2.7.2/lib/python2.7/site-packages/distribute-0.6.21-py2.7.egg))
********************************************
********************************************
Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
Thanks,
Kaylea
On Tue, May 13, 2014 at 7:38 AM, Matthew Turk
Hi Kaylea,
Wow! That's super weird. Would you mind having another go, wiping the yt-x86_64 directory, and trying the "bleeding edge" install script? I'm wondering if one of the updates there -- maybe to SSL or something -- would fix it. Indeed, it shouldn't be using the system python...
-Matt
Hi,
I'm trying to install the latest stable yt version via the install_script.sh on a Red Hat 6 based HPC. I'm getting a very confusing error during the final steps of the installation, which can be seen here: http://paste.yt-project.org/show/4612/
Basically, during the step where yt updates from the repo and then attempts to install, it looks in a very odd place for the distribute python
I can't simply update that version, because I'm on an HPC, but I think
problem is deeper than that. Its looking for it in a version of python
On Mon, May 12, 2014 at 1:29 PM, Kaylea Nelson
wrote: package. the that I don't even have loaded in my environment, in a directory that isn't in my PYTHONPATH. I've tried wiping out my python path prior to install as well, but with the same results. From my understanding, yt shouldn't even be trying to use the system version of python any way?
Any help would be much appreciated!
Kaylea
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
On 13.05.2014 20:00, Kaylea Nelson wrote:
Hi Matt,
Failure. Check /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log. The last 10 lines are above.
On a related note, whenever I install either version, the install also fails when installing ZeroMQ:
Installing mercurial-3.0 Setting YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/ Installing distribute Installing pip Installing numpy-1.7.1 Installing matplotlib-1.3.0 Installing ZeroMQ ******************************************** FAILURE REPORT: ********************************************
CXX libzmq_la-ipc_address.lo CXX libzmq_la-ipc_connecter.lo stream_engine.hpp(97): error #82: storage class is not first const static size_t greeting_size = 12; ^
compilation aborted for ipc_connecter.cpp (code 2) make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1 make[1]: Leaving directory `/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src' make: *** [install-recursive] Error 1
******************************************** ******************************************** Failure. Check /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log. The last 10 lines are above.
But I just fix the const static to static const in stream_engine.hpp and it gets past that particular error (in the stable version anyway). Let me know if I shouldn't be messing with that.
Actually, it appears to get YT_DIR the correctly the first time through, but when I restart it after fixing the ZeroMQ bug, it fails to set YT_DIR. So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to /home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/ (as it was set the first time). If I do this, it gets past the above error and I ultimately get the same error as for the stable version (the original reason of this email):
[hit enter]
Awesome! Here we go.
Using wget Using sha512sum Downloading xray_emissivity.h5 from yt-project.org Installing distribute Installing pip Installing ZeroMQ Installing pyzmq-13.1.0 (arguments: '--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64') Installing tornado-3.1 Installing ipython-1.1.0 Installing h5py-2.1.3 Installing Cython-0.19.1 Installing Forthon-0.8.11 Installing nose-1.3.0 Installing python-hglib-1.0 Installing sympy-0.7.3
Hi Kaylea! [snip]
Doing yt update, wiping local changes and updating to branch yt-3.0 Installing yt
[snip] at this point you should have everything that's required to build yt. Let's try to install it manually outside of the install_script.sh. Setting following env vars should do the trick: export YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64 export PATH=$YT_DIR/bin:$PATH export LD_LIBRARY_PATH=$YT_DIR/lib:$LD_LIBRARY_PATH export PYTHONPATH=$YT_DIR/lib/python2.7/site-packages:$PYTHONPATH export HDF5_DIR=$YT_DIR export PNG_DIR=$YT_DIR then cd $YT_DIR/src/yt-hg hg update -C yt-3.0 python setup.py install --prefix=$YT_DIR Could you please try it out? In the mean time I'll try to setup Red Hat 6 based environment to reproduce your issue. Cheers, Kacper
Cool, that seems to have run ok! But it didn't generate the bin/activate
script?
On Tue, May 13, 2014 at 3:21 PM, Kacper Kowalik
On 13.05.2014 20:00, Kaylea Nelson wrote:
Hi Matt,
Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
On a related note, whenever I install either version, the install also fails when installing ZeroMQ:
Installing mercurial-3.0 Setting
YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
Installing distribute Installing pip Installing numpy-1.7.1 Installing matplotlib-1.3.0 Installing ZeroMQ ******************************************** FAILURE REPORT: ********************************************
CXX libzmq_la-ipc_address.lo CXX libzmq_la-ipc_connecter.lo stream_engine.hpp(97): error #82: storage class is not first const static size_t greeting_size = 12; ^
compilation aborted for ipc_connecter.cpp (code 2) make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1 make[1]: Leaving directory
`/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
make: *** [install-recursive] Error 1
******************************************** ******************************************** Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
But I just fix the const static to static const in stream_engine.hpp and it gets past that particular error (in the stable version anyway). Let me know if I shouldn't be messing with that.
Actually, it appears to get YT_DIR the correctly the first time through, but when I restart it after fixing the ZeroMQ bug, it fails to set YT_DIR. So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
(as it was set the first time). If I do this, it gets past the above error and I ultimately get the same error as for the stable version (the original reason of this email):
[hit enter]
Awesome! Here we go.
Using wget Using sha512sum Downloading xray_emissivity.h5 from yt-project.org Installing distribute Installing pip Installing ZeroMQ Installing pyzmq-13.1.0 (arguments: '--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64') Installing tornado-3.1 Installing ipython-1.1.0 Installing h5py-2.1.3 Installing Cython-0.19.1 Installing Forthon-0.8.11 Installing nose-1.3.0 Installing python-hglib-1.0 Installing sympy-0.7.3
Hi Kaylea!
[snip]
Doing yt update, wiping local changes and updating to branch yt-3.0 Installing yt
[snip]
at this point you should have everything that's required to build yt. Let's try to install it manually outside of the install_script.sh. Setting following env vars should do the trick:
export YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64 export PATH=$YT_DIR/bin:$PATH export LD_LIBRARY_PATH=$YT_DIR/lib:$LD_LIBRARY_PATH export PYTHONPATH=$YT_DIR/lib/python2.7/site-packages:$PYTHONPATH export HDF5_DIR=$YT_DIR export PNG_DIR=$YT_DIR
then
cd $YT_DIR/src/yt-hg hg update -C yt-3.0 python setup.py install --prefix=$YT_DIR
Could you please try it out? In the mean time I'll try to setup Red Hat 6 based environment to reproduce your issue.
Cheers, Kacper
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
On 05/13/2014 10:09 PM, Kaylea Nelson wrote:
Cool, that seems to have run ok! But it didn't generate the bin/activate script?
Unfortunately it didn't. I've pasted the activate script on pastebin[1] so you can download it manually. There's only one line you need to edit: VIRTUAL_ENV="/home/xarth/yt-x86_64" you'll need to change path so that it points to your yt-x86_64 dir. Activate script really boils down to exporting PATH, LD_LIBRARY_PATH, PYTHONPATH. You could also use the same 'export' snippet that you've needed for installation and put it into your .bashrc to have yt activated permanently. Cheers, Kacper [1] http://paste.yt-project.org/show/4620/
On Tue, May 13, 2014 at 3:21 PM, Kacper Kowalik
wrote: On 13.05.2014 20:00, Kaylea Nelson wrote:
Hi Matt,
Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
On a related note, whenever I install either version, the install also fails when installing ZeroMQ:
Installing mercurial-3.0 Setting
YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
Installing distribute Installing pip Installing numpy-1.7.1 Installing matplotlib-1.3.0 Installing ZeroMQ ******************************************** FAILURE REPORT: ********************************************
CXX libzmq_la-ipc_address.lo CXX libzmq_la-ipc_connecter.lo stream_engine.hpp(97): error #82: storage class is not first const static size_t greeting_size = 12; ^
compilation aborted for ipc_connecter.cpp (code 2) make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1 make[1]: Leaving directory
`/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
make: *** [install-recursive] Error 1
******************************************** ******************************************** Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
But I just fix the const static to static const in stream_engine.hpp and it gets past that particular error (in the stable version anyway). Let me know if I shouldn't be messing with that.
Actually, it appears to get YT_DIR the correctly the first time through, but when I restart it after fixing the ZeroMQ bug, it fails to set YT_DIR. So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
(as it was set the first time). If I do this, it gets past the above error and I ultimately get the same error as for the stable version (the original reason of this email):
[hit enter]
Awesome! Here we go.
Using wget Using sha512sum Downloading xray_emissivity.h5 from yt-project.org Installing distribute Installing pip Installing ZeroMQ Installing pyzmq-13.1.0 (arguments: '--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64') Installing tornado-3.1 Installing ipython-1.1.0 Installing h5py-2.1.3 Installing Cython-0.19.1 Installing Forthon-0.8.11 Installing nose-1.3.0 Installing python-hglib-1.0 Installing sympy-0.7.3
Hi Kaylea!
[snip]
Doing yt update, wiping local changes and updating to branch yt-3.0 Installing yt
[snip]
at this point you should have everything that's required to build yt. Let's try to install it manually outside of the install_script.sh. Setting following env vars should do the trick:
export YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64 export PATH=$YT_DIR/bin:$PATH export LD_LIBRARY_PATH=$YT_DIR/lib:$LD_LIBRARY_PATH export PYTHONPATH=$YT_DIR/lib/python2.7/site-packages:$PYTHONPATH export HDF5_DIR=$YT_DIR export PNG_DIR=$YT_DIR
then
cd $YT_DIR/src/yt-hg hg update -C yt-3.0 python setup.py install --prefix=$YT_DIR
Could you please try it out? In the mean time I'll try to setup Red Hat 6 based environment to reproduce your issue.
Cheers, Kacper
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
That seems to have worked. Thanks for the help!
On Wed, May 14, 2014 at 2:06 AM, Kacper Kowalik
On 05/13/2014 10:09 PM, Kaylea Nelson wrote:
Cool, that seems to have run ok! But it didn't generate the bin/activate script?
Unfortunately it didn't. I've pasted the activate script on pastebin[1] so you can download it manually. There's only one line you need to edit:
VIRTUAL_ENV="/home/xarth/yt-x86_64"
you'll need to change path so that it points to your yt-x86_64 dir.
Activate script really boils down to exporting PATH, LD_LIBRARY_PATH, PYTHONPATH. You could also use the same 'export' snippet that you've needed for installation and put it into your .bashrc to have yt activated permanently.
Cheers, Kacper
[1] http://paste.yt-project.org/show/4620/
On Tue, May 13, 2014 at 3:21 PM, Kacper Kowalik
On 13.05.2014 20:00, Kaylea Nelson wrote:
Hi Matt,
Failure. Check
The last 10 lines are above.
On a related note, whenever I install either version, the install also fails when installing ZeroMQ:
Installing mercurial-3.0 Setting
YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
Installing distribute Installing pip Installing numpy-1.7.1 Installing matplotlib-1.3.0 Installing ZeroMQ ******************************************** FAILURE REPORT: ********************************************
CXX libzmq_la-ipc_address.lo CXX libzmq_la-ipc_connecter.lo stream_engine.hpp(97): error #82: storage class is not first const static size_t greeting_size = 12; ^
compilation aborted for ipc_connecter.cpp (code 2) make[1]: *** [libzmq_la-ipc_connecter.lo] Error 1 make[1]: Leaving directory
`/lustre/home/client/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/zeromq-3.2.4/src'
make: *** [install-recursive] Error 1
******************************************** ******************************************** Failure. Check
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log.
The last 10 lines are above.
But I just fix the const static to static const in stream_engine.hpp and it gets past that particular error (in the stable version anyway). Let me know if I shouldn't be messing with that.
Actually, it appears to get YT_DIR the correctly the first time
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/yt_install.log. through,
but when I restart it after fixing the ZeroMQ bug, it fails to set YT_DIR. So, just to be extra thorough, I tried manually setting YT_DIR on l.54 to
/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64/src/yt-hg/
(as it was set the first time). If I do this, it gets past the above error and I ultimately get the same error as for the stable version (the original reason of this email):
[hit enter]
Awesome! Here we go.
Using wget Using sha512sum Downloading xray_emissivity.h5 from yt-project.org Installing distribute Installing pip Installing ZeroMQ Installing pyzmq-13.1.0 (arguments:
'--zmq=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64')
Installing tornado-3.1 Installing ipython-1.1.0 Installing h5py-2.1.3 Installing Cython-0.19.1 Installing Forthon-0.8.11 Installing nose-1.3.0 Installing python-hglib-1.0 Installing sympy-0.7.3
Hi Kaylea!
[snip]
Doing yt update, wiping local changes and updating to branch yt-3.0 Installing yt
[snip]
at this point you should have everything that's required to build yt. Let's try to install it manually outside of the install_script.sh. Setting following env vars should do the trick:
export YT_DIR=/home/fas/nagai/kln26/programs/yt_dir/yt_bleedingedge/yt-x86_64 export PATH=$YT_DIR/bin:$PATH export LD_LIBRARY_PATH=$YT_DIR/lib:$LD_LIBRARY_PATH export PYTHONPATH=$YT_DIR/lib/python2.7/site-packages:$PYTHONPATH export HDF5_DIR=$YT_DIR export PNG_DIR=$YT_DIR
then
cd $YT_DIR/src/yt-hg hg update -C yt-3.0 python setup.py install --prefix=$YT_DIR
Could you please try it out? In the mean time I'll try to setup Red Hat 6 based environment to reproduce your issue.
Cheers, Kacper
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
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participants (3)
-
Kacper Kowalik
-
Kaylea Nelson
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Matthew Turk