YT-3.0 - quick question - teething problems....
Hi All, I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things #Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename) This fails with: File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load' If instead I change the script to be: #Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined Any ideas what's happening here? Cheers, John (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 The current version of the code is: --- 38fff02747ca --- This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014 (yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
Hi John, Now that the main import in the recipes has changes from "from yt.mods import *" to "import yt", all of those things that used to be in the main namespace are now in the yt namespace. If you make it "yt.ProfilePlot", you should be fine. Only slightly related, but probably worth mentioning, to run in parallel when using "import yt", you will want to put "yt.enable_parallelism()" after the import instead of giving the --parallel flag on the command line. Britton On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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Hi Britton, I agree that should work but it seems my problems are deeper for some reason. If I do ################################### import yt filename = "RD0000/RD0000" ds = yt.load(filename) ################################### I'll get an error with: (yt-x86_64)[regan@taito-login3 RT]$ pyyt test.py Traceback (most recent call last): File "test.py", line 5, in <module> ds = yt.load(filename) NameError: name 'yt' is not defined For some reason my build isn't picking up the correct modules. John On Mon, Sep 15, 2014 at 1:40 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
Now that the main import in the recipes has changes from "from yt.mods import *" to "import yt", all of those things that used to be in the main namespace are now in the yt namespace. If you make it "yt.ProfilePlot", you should be fine.
Only slightly related, but probably worth mentioning, to run in parallel when using "import yt", you will want to put "yt.enable_parallelism()" after the import instead of giving the --parallel flag on the command line.
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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Hi John, D'oh, sorry, that's what I get for trying to answer emails before enough coffee. Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work? Britton On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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It 50% works in that case. load works but ProfilePlot fails! File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined Totally confused :) On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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What changeset of yt are you on? What do you get with "yt instinfo"? On Mon, Sep 15, 2014 at 11:57 AM, John Regan <johnanthonyregan@gmail.com> wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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The latest I hope :) (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0 The current version of the code is: --- 38fff02747ca --- This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014 (yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com> wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan <johnanthonyregan@gmail.com> wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan <johnanthonyregan@gmail.com
wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
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_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
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Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then. On Mon, Sep 15, 2014 at 12:05 PM, John Regan <johnanthonyregan@gmail.com> wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com> wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan <johnanthonyregan@gmail.com> wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan < johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt
/homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
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_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
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I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines: Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now. The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch? On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan <johnanthonyregan@gmail.com> wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com> wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan <johnanthonyregan@gmail.com
wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan < johnanthonyregan@gmail.com> wrote:
Hi All,
I'm having some teething problems with 3.0. It seems that I have a conflict somewhere but I can't see where. For example I have a very simple script which is doing weird things
#Simple simple script import yt filename = "....../RD0000/RD0000" ds = yt.load(filename)
This fails with:
File "test.py", line 6, in <module> ds = yt.load(filename) AttributeError: 'module' object has no attribute 'load'
If instead I change the script to be:
#Simple simple script from yt.mods import * filename = "......../RD0000/RD0000" ds = load(filename) sp = ds.h.sphere('max', (10, 'kpc')) prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction")
This now loads the file but fails on: File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Any ideas what's happening here?
Cheers, John
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt
/homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
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I think your repo is probably missing most of the latest changes. Make sure you "hg pull" before you do "hg up yt" and python setup.py develop. On Mon, Sep 15, 2014 at 12:30 PM, John Regan <johnanthonyregan@gmail.com> wrote:
I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines:
Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin
Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev
It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now.
The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch?
On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan <johnanthonyregan@gmail.com> wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com> wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan < johnanthonyregan@gmail.com> wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith <brittonsmith@gmail.com
wrote:
Hi John,
D'oh, sorry, that's what I get for trying to answer emails before enough coffee.
Question, if you do "from yt.mods import *" and remove the yt from yt.load and yt.ProfilePlot, do things work?
Britton
On Mon, Sep 15, 2014 at 10:56 AM, John Regan < johnanthonyregan@gmail.com> wrote:
> Hi All, > > I'm having some teething problems with 3.0. > It seems that I have a conflict somewhere but I can't see where. For > example I have a very simple script which is doing weird things > > #Simple simple script > import yt > filename = "....../RD0000/RD0000" > ds = yt.load(filename) > > > This fails with: > > File "test.py", line 6, in <module> > ds = yt.load(filename) > AttributeError: 'module' object has no attribute 'load' > > If instead I change the script to be: > > #Simple simple script > from yt.mods import * > filename = "......../RD0000/RD0000" > ds = load(filename) > sp = ds.h.sphere('max', (10, 'kpc')) > prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") > > This now loads the file but fails on: > File "test.py", line 9, in <module> > prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") > NameError: name 'ProfilePlot' is not defined > > > Any ideas what's happening here? > > Cheers, > John > > > (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo > > yt module located at: > /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 > > The current version of the code is: > > --- > 38fff02747ca > --- > > This installation CAN be automatically updated. > yt dependencies were last updated on > Mon Sep 15 12:40:51 EEST 2014 > > > (yt-x86_64)[regan@taito-login3 RT]$ which pyyt > > /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt > > > _______________________________________________ > yt-users mailing list > yt-users@lists.spacepope.org > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org > >
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Running "hg pull" seems to indicate that I am up2date but like you said there does seem to be a problem with my repos (yt-x86_64)[regan@taito-login3 yt-3.0]$ hg pull pulling from ssh://hg@bitbucket.org/yt_analysis/yt-3.0 searching for changes no changes found (yt-x86_64)[regan@taito-login3 yt-3.0]$ hg up yt 0 files updated, 0 files merged, 0 files removed, 0 files unresolved Is there an easy to check if I am on the tip to see if my repos is actually OK or not? On Mon, Sep 15, 2014 at 2:37 PM, Britton Smith <brittonsmith@gmail.com> wrote:
I think your repo is probably missing most of the latest changes. Make sure you "hg pull" before you do "hg up yt" and python setup.py develop.
On Mon, Sep 15, 2014 at 12:30 PM, John Regan <johnanthonyregan@gmail.com> wrote:
I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines:
Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin
Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev
It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now.
The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch?
On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan <johnanthonyregan@gmail.com
wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com> wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan < johnanthonyregan@gmail.com> wrote:
It 50% works in that case.
load works but ProfilePlot fails!
File "test.py", line 9, in <module> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") NameError: name 'ProfilePlot' is not defined
Totally confused :)
On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith < brittonsmith@gmail.com> wrote:
> Hi John, > > D'oh, sorry, that's what I get for trying to answer emails before > enough coffee. > > Question, if you do "from yt.mods import *" and remove the yt from > yt.load and yt.ProfilePlot, do things work? > > Britton > > On Mon, Sep 15, 2014 at 10:56 AM, John Regan < > johnanthonyregan@gmail.com> wrote: > >> Hi All, >> >> I'm having some teething problems with 3.0. >> It seems that I have a conflict somewhere but I can't see where. >> For example I have a very simple script which is doing weird things >> >> #Simple simple script >> import yt >> filename = "....../RD0000/RD0000" >> ds = yt.load(filename) >> >> >> This fails with: >> >> File "test.py", line 6, in <module> >> ds = yt.load(filename) >> AttributeError: 'module' object has no attribute 'load' >> >> If instead I change the script to be: >> >> #Simple simple script >> from yt.mods import * >> filename = "......../RD0000/RD0000" >> ds = load(filename) >> sp = ds.h.sphere('max', (10, 'kpc')) >> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >> >> This now loads the file but fails on: >> File "test.py", line 9, in <module> >> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >> NameError: name 'ProfilePlot' is not defined >> >> >> Any ideas what's happening here? >> >> Cheers, >> John >> >> >> (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo >> >> yt module located at: >> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 >> >> The current version of the code is: >> >> --- >> 38fff02747ca >> --- >> >> This installation CAN be automatically updated. >> yt dependencies were last updated on >> Mon Sep 15 12:40:51 EEST 2014 >> >> >> (yt-x86_64)[regan@taito-login3 RT]$ which pyyt >> >> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt >> >> >> _______________________________________________ >> yt-users mailing list >> yt-users@lists.spacepope.org >> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >> >> > > _______________________________________________ > yt-users mailing list > yt-users@lists.spacepope.org > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org > >
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Ah, yes, the repo is actually bitbucket.org/yt_analysis/yt The one you have there was the original development repo from a while back. Since, then development was merged into the main repo (yt, not yt-3.0). You can always do "hg log -l 1" after "hg pull" to see the log of the very latest change in that repo. yt development happens fast enough that if that the date on that changeset is from more than a month ago, it's likely you're not getting the latest changes. On Mon, Sep 15, 2014 at 12:48 PM, John Regan <johnanthonyregan@gmail.com> wrote:
Running "hg pull" seems to indicate that I am up2date but like you said there does seem to be a problem with my repos
(yt-x86_64)[regan@taito-login3 yt-3.0]$ hg pull pulling from ssh://hg@bitbucket.org/yt_analysis/yt-3.0 searching for changes no changes found (yt-x86_64)[regan@taito-login3 yt-3.0]$ hg up yt 0 files updated, 0 files merged, 0 files removed, 0 files unresolved
Is there an easy to check if I am on the tip to see if my repos is actually OK or not?
On Mon, Sep 15, 2014 at 2:37 PM, Britton Smith <brittonsmith@gmail.com> wrote:
I think your repo is probably missing most of the latest changes. Make sure you "hg pull" before you do "hg up yt" and python setup.py develop.
On Mon, Sep 15, 2014 at 12:30 PM, John Regan <johnanthonyregan@gmail.com> wrote:
I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines:
Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin
Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev
It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now.
The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch?
On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan < johnanthonyregan@gmail.com> wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt
/homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith <brittonsmith@gmail.com
wrote:
What changeset of yt are you on? What do you get with "yt instinfo"?
On Mon, Sep 15, 2014 at 11:57 AM, John Regan < johnanthonyregan@gmail.com> wrote:
> It 50% works in that case. > > load works but ProfilePlot fails! > > File "test.py", line 9, in <module> > prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") > NameError: name 'ProfilePlot' is not defined > > Totally confused :) > > On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith < > brittonsmith@gmail.com> wrote: > >> Hi John, >> >> D'oh, sorry, that's what I get for trying to answer emails before >> enough coffee. >> >> Question, if you do "from yt.mods import *" and remove the yt from >> yt.load and yt.ProfilePlot, do things work? >> >> Britton >> >> On Mon, Sep 15, 2014 at 10:56 AM, John Regan < >> johnanthonyregan@gmail.com> wrote: >> >>> Hi All, >>> >>> I'm having some teething problems with 3.0. >>> It seems that I have a conflict somewhere but I can't see where. >>> For example I have a very simple script which is doing weird things >>> >>> #Simple simple script >>> import yt >>> filename = "....../RD0000/RD0000" >>> ds = yt.load(filename) >>> >>> >>> This fails with: >>> >>> File "test.py", line 6, in <module> >>> ds = yt.load(filename) >>> AttributeError: 'module' object has no attribute 'load' >>> >>> If instead I change the script to be: >>> >>> #Simple simple script >>> from yt.mods import * >>> filename = "......../RD0000/RD0000" >>> ds = load(filename) >>> sp = ds.h.sphere('max', (10, 'kpc')) >>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>> >>> This now loads the file but fails on: >>> File "test.py", line 9, in <module> >>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>> NameError: name 'ProfilePlot' is not defined >>> >>> >>> Any ideas what's happening here? >>> >>> Cheers, >>> John >>> >>> >>> (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo >>> >>> yt module located at: >>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 >>> >>> The current version of the code is: >>> >>> --- >>> 38fff02747ca >>> --- >>> >>> This installation CAN be automatically updated. >>> yt dependencies were last updated on >>> Mon Sep 15 12:40:51 EEST 2014 >>> >>> >>> (yt-x86_64)[regan@taito-login3 RT]$ which pyyt >>> >>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt >>> >>> >>> _______________________________________________ >>> yt-users mailing list >>> yt-users@lists.spacepope.org >>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>> >>> >> >> _______________________________________________ >> yt-users mailing list >> yt-users@lists.spacepope.org >> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >> >> > > _______________________________________________ > yt-users mailing list > yt-users@lists.spacepope.org > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org > >
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Yeah I think this is getting closer to the solution now. I reckon I was constantly pulling from yt-3.0 - not sure why that happened of course. I've been doing hg log | head and I see the last entry was December last year - not good :) I've now started over and cloned from hg clone ssh://hg@bitbucket.org/yt_analysis/yt hopefully that solve all my troubles (well my YT ones at least....) On Mon, Sep 15, 2014 at 3:02 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, yes, the repo is actually bitbucket.org/yt_analysis/yt The one you have there was the original development repo from a while back. Since, then development was merged into the main repo (yt, not yt-3.0).
You can always do "hg log -l 1" after "hg pull" to see the log of the very latest change in that repo. yt development happens fast enough that if that the date on that changeset is from more than a month ago, it's likely you're not getting the latest changes.
On Mon, Sep 15, 2014 at 12:48 PM, John Regan <johnanthonyregan@gmail.com> wrote:
Running "hg pull" seems to indicate that I am up2date but like you said there does seem to be a problem with my repos
(yt-x86_64)[regan@taito-login3 yt-3.0]$ hg pull pulling from ssh://hg@bitbucket.org/yt_analysis/yt-3.0 searching for changes no changes found (yt-x86_64)[regan@taito-login3 yt-3.0]$ hg up yt 0 files updated, 0 files merged, 0 files removed, 0 files unresolved
Is there an easy to check if I am on the tip to see if my repos is actually OK or not?
On Mon, Sep 15, 2014 at 2:37 PM, Britton Smith <brittonsmith@gmail.com> wrote:
I think your repo is probably missing most of the latest changes. Make sure you "hg pull" before you do "hg up yt" and python setup.py develop.
On Mon, Sep 15, 2014 at 12:30 PM, John Regan <johnanthonyregan@gmail.com
wrote:
I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines:
Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin
Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev
It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now.
The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch?
On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan < johnanthonyregan@gmail.com> wrote:
The latest I hope :)
(yt-x86_64)[regan@taito-login3 RT]$ yt instinfo
yt module located at: /homeappl/home/regan/appl_ taito/YT/Dev-3.0/yt-3.0
The current version of the code is:
--- 38fff02747ca ---
This installation CAN be automatically updated. yt dependencies were last updated on Mon Sep 15 12:40:51 EEST 2014
(yt-x86_64)[regan@taito-login3 RT]$ which pyyt
/homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt
On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith < brittonsmith@gmail.com> wrote:
> What changeset of yt are you on? What do you get with "yt instinfo"? > > On Mon, Sep 15, 2014 at 11:57 AM, John Regan < > johnanthonyregan@gmail.com> wrote: > >> It 50% works in that case. >> >> load works but ProfilePlot fails! >> >> File "test.py", line 9, in <module> >> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >> NameError: name 'ProfilePlot' is not defined >> >> Totally confused :) >> >> On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith < >> brittonsmith@gmail.com> wrote: >> >>> Hi John, >>> >>> D'oh, sorry, that's what I get for trying to answer emails before >>> enough coffee. >>> >>> Question, if you do "from yt.mods import *" and remove the yt from >>> yt.load and yt.ProfilePlot, do things work? >>> >>> Britton >>> >>> On Mon, Sep 15, 2014 at 10:56 AM, John Regan < >>> johnanthonyregan@gmail.com> wrote: >>> >>>> Hi All, >>>> >>>> I'm having some teething problems with 3.0. >>>> It seems that I have a conflict somewhere but I can't see where. >>>> For example I have a very simple script which is doing weird things >>>> >>>> #Simple simple script >>>> import yt >>>> filename = "....../RD0000/RD0000" >>>> ds = yt.load(filename) >>>> >>>> >>>> This fails with: >>>> >>>> File "test.py", line 6, in <module> >>>> ds = yt.load(filename) >>>> AttributeError: 'module' object has no attribute 'load' >>>> >>>> If instead I change the script to be: >>>> >>>> #Simple simple script >>>> from yt.mods import * >>>> filename = "......../RD0000/RD0000" >>>> ds = load(filename) >>>> sp = ds.h.sphere('max', (10, 'kpc')) >>>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>>> >>>> This now loads the file but fails on: >>>> File "test.py", line 9, in <module> >>>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>>> NameError: name 'ProfilePlot' is not defined >>>> >>>> >>>> Any ideas what's happening here? >>>> >>>> Cheers, >>>> John >>>> >>>> >>>> (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo >>>> >>>> yt module located at: >>>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 >>>> >>>> The current version of the code is: >>>> >>>> --- >>>> 38fff02747ca >>>> --- >>>> >>>> This installation CAN be automatically updated. >>>> yt dependencies were last updated on >>>> Mon Sep 15 12:40:51 EEST 2014 >>>> >>>> >>>> (yt-x86_64)[regan@taito-login3 RT]$ which pyyt >>>> >>>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt >>>> >>>> >>>> _______________________________________________ >>>> yt-users mailing list >>>> yt-users@lists.spacepope.org >>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>>> >>>> >>> >>> _______________________________________________ >>> yt-users mailing list >>> yt-users@lists.spacepope.org >>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>> >>> >> >> _______________________________________________ >> yt-users mailing list >> yt-users@lists.spacepope.org >> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >> >> > > _______________________________________________ > yt-users mailing list > yt-users@lists.spacepope.org > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org > >
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OK that seemed to fix the problem and the patient seems much better now. Thanks! On Mon, Sep 15, 2014 at 3:18 PM, John Regan <johnanthonyregan@gmail.com> wrote:
Yeah I think this is getting closer to the solution now. I reckon I was constantly pulling from yt-3.0 - not sure why that happened of course. I've been doing hg log | head and I see the last entry was December last year - not good :)
I've now started over and cloned from hg clone ssh://hg@bitbucket.org/yt_analysis/yt
hopefully that solve all my troubles (well my YT ones at least....)
On Mon, Sep 15, 2014 at 3:02 PM, Britton Smith <brittonsmith@gmail.com> wrote:
Ah, yes, the repo is actually bitbucket.org/yt_analysis/yt The one you have there was the original development repo from a while back. Since, then development was merged into the main repo (yt, not yt-3.0).
You can always do "hg log -l 1" after "hg pull" to see the log of the very latest change in that repo. yt development happens fast enough that if that the date on that changeset is from more than a month ago, it's likely you're not getting the latest changes.
On Mon, Sep 15, 2014 at 12:48 PM, John Regan <johnanthonyregan@gmail.com> wrote:
Running "hg pull" seems to indicate that I am up2date but like you said there does seem to be a problem with my repos
(yt-x86_64)[regan@taito-login3 yt-3.0]$ hg pull pulling from ssh://hg@bitbucket.org/yt_analysis/yt-3.0 searching for changes no changes found (yt-x86_64)[regan@taito-login3 yt-3.0]$ hg up yt 0 files updated, 0 files merged, 0 files removed, 0 files unresolved
Is there an easy to check if I am on the tip to see if my repos is actually OK or not?
On Mon, Sep 15, 2014 at 2:37 PM, Britton Smith <brittonsmith@gmail.com> wrote:
I think your repo is probably missing most of the latest changes. Make sure you "hg pull" before you do "hg up yt" and python setup.py develop.
On Mon, Sep 15, 2014 at 12:30 PM, John Regan < johnanthonyregan@gmail.com> wrote:
I ran "python setup.py develop" which I think I missed before when trying to switch to the new branch. At the end of the output there are some weird lines:
Creating /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/lib/python2.7/site-packages/yt.egg-link (link to .) yt 2.6dev is already the active version in easy-install.pth Installing yt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing pyro_queue.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing yt_lodgeit.py script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin Installing iyt script to /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin
Installed /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 Processing dependencies for yt==2.6dev Finished processing dependencies for yt==2.6dev
It looks like it is updating to the 2.6dev for some reason. The changeset is c53475f4d73a now.
The script also still fails in the same way as before - it seems I'm still not on the 3.0 dev branch?
On Mon, Sep 15, 2014 at 2:09 PM, Britton Smith <brittonsmith@gmail.com
wrote:
Ah, ok, that changeset is in the yt-3.0 branch, which has been all but closed. Development for yt-3.0 has moved to the yt branch. You'll need to "hg pull ; hg up yt" and do another "python setup.py develop" and I think you'll be ok then.
On Mon, Sep 15, 2014 at 12:05 PM, John Regan < johnanthonyregan@gmail.com> wrote:
> The latest I hope :) > > (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo > > yt module located at: > /homeappl/home/regan/appl_ > taito/YT/Dev-3.0/yt-3.0 > > The current version of the code is: > > --- > 38fff02747ca > --- > > This installation CAN be automatically updated. > yt dependencies were last updated on > Mon Sep 15 12:40:51 EEST 2014 > > > (yt-x86_64)[regan@taito-login3 RT]$ which pyyt > > /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt > > > On Mon, Sep 15, 2014 at 2:03 PM, Britton Smith < > brittonsmith@gmail.com> wrote: > >> What changeset of yt are you on? What do you get with "yt >> instinfo"? >> >> On Mon, Sep 15, 2014 at 11:57 AM, John Regan < >> johnanthonyregan@gmail.com> wrote: >> >>> It 50% works in that case. >>> >>> load works but ProfilePlot fails! >>> >>> File "test.py", line 9, in <module> >>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>> NameError: name 'ProfilePlot' is not defined >>> >>> Totally confused :) >>> >>> On Mon, Sep 15, 2014 at 1:54 PM, Britton Smith < >>> brittonsmith@gmail.com> wrote: >>> >>>> Hi John, >>>> >>>> D'oh, sorry, that's what I get for trying to answer emails before >>>> enough coffee. >>>> >>>> Question, if you do "from yt.mods import *" and remove the yt >>>> from yt.load and yt.ProfilePlot, do things work? >>>> >>>> Britton >>>> >>>> On Mon, Sep 15, 2014 at 10:56 AM, John Regan < >>>> johnanthonyregan@gmail.com> wrote: >>>> >>>>> Hi All, >>>>> >>>>> I'm having some teething problems with 3.0. >>>>> It seems that I have a conflict somewhere but I can't see where. >>>>> For example I have a very simple script which is doing weird things >>>>> >>>>> #Simple simple script >>>>> import yt >>>>> filename = "....../RD0000/RD0000" >>>>> ds = yt.load(filename) >>>>> >>>>> >>>>> This fails with: >>>>> >>>>> File "test.py", line 6, in <module> >>>>> ds = yt.load(filename) >>>>> AttributeError: 'module' object has no attribute 'load' >>>>> >>>>> If instead I change the script to be: >>>>> >>>>> #Simple simple script >>>>> from yt.mods import * >>>>> filename = "......../RD0000/RD0000" >>>>> ds = load(filename) >>>>> sp = ds.h.sphere('max', (10, 'kpc')) >>>>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>>>> >>>>> This now loads the file but fails on: >>>>> File "test.py", line 9, in <module> >>>>> prof1d = ProfilePlot(sphere, "radius", "H2I_Fraction") >>>>> NameError: name 'ProfilePlot' is not defined >>>>> >>>>> >>>>> Any ideas what's happening here? >>>>> >>>>> Cheers, >>>>> John >>>>> >>>>> >>>>> (yt-x86_64)[regan@taito-login3 RT]$ yt instinfo >>>>> >>>>> yt module located at: >>>>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0 >>>>> >>>>> The current version of the code is: >>>>> >>>>> --- >>>>> 38fff02747ca >>>>> --- >>>>> >>>>> This installation CAN be automatically updated. >>>>> yt dependencies were last updated on >>>>> Mon Sep 15 12:40:51 EEST 2014 >>>>> >>>>> >>>>> (yt-x86_64)[regan@taito-login3 RT]$ which pyyt >>>>> >>>>> /homeappl/home/regan/appl_taito/YT/Dev-3.0/yt-3.0/doc/yt-x86_64/bin/pyyt >>>>> >>>>> >>>>> _______________________________________________ >>>>> yt-users mailing list >>>>> yt-users@lists.spacepope.org >>>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>>>> >>>>> >>>> >>>> _______________________________________________ >>>> yt-users mailing list >>>> yt-users@lists.spacepope.org >>>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>>> >>>> >>> >>> _______________________________________________ >>> yt-users mailing list >>> yt-users@lists.spacepope.org >>> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >>> >>> >> >> _______________________________________________ >> yt-users mailing list >> yt-users@lists.spacepope.org >> http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org >> >> > > _______________________________________________ > yt-users mailing list > yt-users@lists.spacepope.org > http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org > >
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