Hello yt users, I'm working with Daniel Schwen of the MOOSE team to install yt from source. He is running OS X Yosemite, and trying to install yt over a miniconda python. After cloning my yt repository, the install script fails with the attached traceback. Does anyone have any ideas? Thanks, Andrew [10][schwd][~/Downloads/yt-hg]> CFLAGS="-I/opt/local/include" LDFLAGS="-L/opt/local/lib" python setup.py develop /opt/moose/miniconda/lib/python2.7/site-packages/setuptools-18.3.2-py2.7.egg/setuptools/dist.py:285: UserWarning: Normalizing '3.3-dev' to '3.3.dev0' non-existing path in 'yt/utilities/spatial': 'yt/utilities/spatial/tests' Traceback (most recent call last): File "setup.py", line 227, in <module> setup_package() File "setup.py", line 222, in setup_package cmdclass={'build_py': my_build_py, 'build_src': my_build_src}, File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/core.py", line 135, in setup config = configuration() File "setup.py", line 178, in configuration config.add_subpackage('yt', 'yt') File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/setup.py", line 18, in configuration config.add_subpackage('utilities') File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/utilities/setup.py", line 161, in configuration config.add_subpackage("lib") File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/utilities/lib/setup.py", line 57, in configuration if check_for_openmp() == True: File "yt/utilities/lib/setup.py", line 37, in check_for_openmp stdout=fnull, stderr=fnull) File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 522, in call return Popen(*popenargs, **kwargs).wait() File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 710, in __init__ errread, errwrite) File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 1335, in _execute_child raise child_exception OSError: [Errno 2] No such file or directory
Hi Daniel,
Could you try running this http://paste.yt-project.org/show/5902/ python
script using the same python you're trying to install yt with? Does it give
you some output, or does it fail with the same error message?
Thanks,
Andrew
On Thu, Sep 24, 2015 at 12:05 PM, Andrew Myers
Hello yt users,
I'm working with Daniel Schwen of the MOOSE team to install yt from source. He is running OS X Yosemite, and trying to install yt over a miniconda python. After cloning my yt repository, the install script fails with the attached traceback. Does anyone have any ideas?
Thanks, Andrew
[10][schwd][~/Downloads/yt-hg]> CFLAGS="-I/opt/local/include" LDFLAGS="-L/opt/local/lib" python setup.py develop
/opt/moose/miniconda/lib/python2.7/site-packages/setuptools-18.3.2-py2.7.egg/setuptools/dist.py:285: UserWarning: Normalizing '3.3-dev' to '3.3.dev0' non-existing path in 'yt/utilities/spatial': 'yt/utilities/spatial/tests' Traceback (most recent call last): File "setup.py", line 227, in <module> setup_package() File "setup.py", line 222, in setup_package cmdclass={'build_py': my_build_py, 'build_src': my_build_src}, File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/core.py", line 135, in setup config = configuration() File "setup.py", line 178, in configuration config.add_subpackage('yt', 'yt') File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/setup.py", line 18, in configuration config.add_subpackage('utilities') File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/utilities/setup.py", line 161, in configuration config.add_subpackage("lib") File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 966, in add_subpackage caller_level = 2) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 935, in get_subpackage caller_level = caller_level + 1) File "/opt/moose/miniconda/lib/python2.7/site-packages/numpy/ distutils/misc_util.py", line 872, in _get_configuration_from_setup_py config = setup_module.configuration(*args) File "yt/utilities/lib/setup.py", line 57, in configuration if check_for_openmp() == True: File "yt/utilities/lib/setup.py", line 37, in check_for_openmp stdout=fnull, stderr=fnull) File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 522, in call return Popen(*popenargs, **kwargs).wait() File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 710, in __init__ errread, errwrite) File "/opt/moose/miniconda/lib/python2.7/subprocess.py", line 1335, in _execute_child raise child_exception OSError: [Errno 2] No such file or directory
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Andrew Myers