installing yt on mac 10.11
Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
Hi Akimi,
Extracting the relevant bit from the end of your install log, here is the
error: http://paste.yt-project.org/show/5974/
So it seems there's a syntax error in a header provided by OSX that python
is indirectly including, breaking the build. I don't see any references to
this issue on google or on python's bug tracker, so I'm not sure what the
appropriate workaround is. Unfortunately I don't have a box with 10.11
installed to see if I can reproduce this.
Has anyone had success running the install script on 10.11?
Finally, a more brute-force workaround might be to set up your yt
environment using miniconda, which comes bundled with a precompiled version
of python.
Best,
Nathan
On Wed, Oct 14, 2015 at 8:17 AM, 藤田あき美*
Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
Hi Akimi,
I just wanted to say that I have had this problem as well, although I
haven't figured out a solution yet. It appears to be something to do with
the latest version of Mac and the mac compilers. I am going to play around
with this more when I get a chance, and will update if I find anything.
--Greg
On Wed, Oct 14, 2015 at 11:29 AM, Nathan Goldbaum
Hi Akimi,
Extracting the relevant bit from the end of your install log, here is the error: http://paste.yt-project.org/show/5974/
So it seems there's a syntax error in a header provided by OSX that python is indirectly including, breaking the build. I don't see any references to this issue on google or on python's bug tracker, so I'm not sure what the appropriate workaround is. Unfortunately I don't have a box with 10.11 installed to see if I can reproduce this.
Has anyone had success running the install script on 10.11?
Finally, a more brute-force workaround might be to set up your yt environment using miniconda, which comes bundled with a precompiled version of python.
Best,
Nathan
On Wed, Oct 14, 2015 at 8:17 AM, 藤田あき美*
wrote: Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Gregory Meece Michigan State University Department of Physics and Astronomy http://galactica.pa.msu.edu/~gmeece
I've borrowed a laptop 10.11 installed on it from NCSA and am planning to
look at this this weekend. I will update the thread if I find a solution.
On Wednesday, October 14, 2015, Greg Meece
Hi Akimi,
I just wanted to say that I have had this problem as well, although I haven't figured out a solution yet. It appears to be something to do with the latest version of Mac and the mac compilers. I am going to play around with this more when I get a chance, and will update if I find anything.
--Greg
On Wed, Oct 14, 2015 at 11:29 AM, Nathan Goldbaum
javascript:_e(%7B%7D,'cvml','nathan12343@gmail.com');> wrote: Hi Akimi,
Extracting the relevant bit from the end of your install log, here is the error: http://paste.yt-project.org/show/5974/
So it seems there's a syntax error in a header provided by OSX that python is indirectly including, breaking the build. I don't see any references to this issue on google or on python's bug tracker, so I'm not sure what the appropriate workaround is. Unfortunately I don't have a box with 10.11 installed to see if I can reproduce this.
Has anyone had success running the install script on 10.11?
Finally, a more brute-force workaround might be to set up your yt environment using miniconda, which comes bundled with a precompiled version of python.
Best,
Nathan
On Wed, Oct 14, 2015 at 8:17 AM, 藤田あき美*
javascript:_e(%7B%7D,'cvml','fujitaa@shinshu-u.ac.jp');> wrote: Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org javascript:_e(%7B%7D,'cvml','yt-users@lists.spacepope.org'); http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org javascript:_e(%7B%7D,'cvml','yt-users@lists.spacepope.org'); http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Gregory Meece Michigan State University Department of Physics and Astronomy http://galactica.pa.msu.edu/~gmeece
I think we have a solution for this, and I'd appreciate both your help in
testing it out.
Rather than using the install script, we have an alternate script
"get_yt.sh" that sets up miniconda and installs yt using conda.
Can you two try downloading the following script using e.g. "wget" or "curl
-O":
https://bitbucket.org/ngoldbaum/yt/raw/847992425cebd26d32fee6c6576c11fa24124...
You can then run it just like the install script with
$ bash get_yt.sh
Unlike the install script, there is no need to run an activate script, you
will just need to prepend a directory to your PATH. At the end of the
script, it will print out the appropriate bash command to do that.
If this works for you, it would help us out to know that. If it doesn't
work, it would also help if you could tell us how it failed.
I hope this is a good solution going forward,
Nathan
On Fri, Oct 23, 2015 at 7:13 PM, Nathan Goldbaum
I've borrowed a laptop 10.11 installed on it from NCSA and am planning to look at this this weekend. I will update the thread if I find a solution.
On Wednesday, October 14, 2015, Greg Meece
wrote: Hi Akimi,
I just wanted to say that I have had this problem as well, although I haven't figured out a solution yet. It appears to be something to do with the latest version of Mac and the mac compilers. I am going to play around with this more when I get a chance, and will update if I find anything.
--Greg
On Wed, Oct 14, 2015 at 11:29 AM, Nathan Goldbaum
wrote: Hi Akimi,
Extracting the relevant bit from the end of your install log, here is the error: http://paste.yt-project.org/show/5974/
So it seems there's a syntax error in a header provided by OSX that python is indirectly including, breaking the build. I don't see any references to this issue on google or on python's bug tracker, so I'm not sure what the appropriate workaround is. Unfortunately I don't have a box with 10.11 installed to see if I can reproduce this.
Has anyone had success running the install script on 10.11?
Finally, a more brute-force workaround might be to set up your yt environment using miniconda, which comes bundled with a precompiled version of python.
Best,
Nathan
On Wed, Oct 14, 2015 at 8:17 AM, 藤田あき美*
wrote: Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Gregory Meece Michigan State University Department of Physics and Astronomy http://galactica.pa.msu.edu/~gmeece
It did work! Thanks! Akimi
2015-10-28 6:51 GMT+09:00 Nathan Goldbaum
I think we have a solution for this, and I'd appreciate both your help in testing it out.
Rather than using the install script, we have an alternate script "get_yt.sh" that sets up miniconda and installs yt using conda.
Can you two try downloading the following script using e.g. "wget" or "curl -O":
https://bitbucket.org/ngoldbaum/yt/raw/847992425cebd26d32fee6c6576c11fa24124...
You can then run it just like the install script with
$ bash get_yt.sh
Unlike the install script, there is no need to run an activate script, you will just need to prepend a directory to your PATH. At the end of the script, it will print out the appropriate bash command to do that.
If this works for you, it would help us out to know that. If it doesn't work, it would also help if you could tell us how it failed.
I hope this is a good solution going forward,
Nathan
On Fri, Oct 23, 2015 at 7:13 PM, Nathan Goldbaum
wrote: I've borrowed a laptop 10.11 installed on it from NCSA and am planning to look at this this weekend. I will update the thread if I find a solution.
On Wednesday, October 14, 2015, Greg Meece
wrote: Hi Akimi,
I just wanted to say that I have had this problem as well, although I haven't figured out a solution yet. It appears to be something to do with the latest version of Mac and the mac compilers. I am going to play around with this more when I get a chance, and will update if I find anything.
--Greg
On Wed, Oct 14, 2015 at 11:29 AM, Nathan Goldbaum
wrote:
Hi Akimi,
Extracting the relevant bit from the end of your install log, here is the error: http://paste.yt-project.org/show/5974/
So it seems there's a syntax error in a header provided by OSX that python is indirectly including, breaking the build. I don't see any references to this issue on google or on python's bug tracker, so I'm not sure what the appropriate workaround is. Unfortunately I don't have a box with 10.11 installed to see if I can reproduce this.
Has anyone had success running the install script on 10.11?
Finally, a more brute-force workaround might be to set up your yt environment using miniconda, which comes bundled with a precompiled version of python.
Best,
Nathan
On Wed, Oct 14, 2015 at 8:17 AM, 藤田あき美*
wrote: Hi, I am not able to install yt.3 (stable version, using install_script.sh) on my new mac 10.11. Could anybody help? I attach yt_install.log. Thank you. Akimi
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
-- Gregory Meece Michigan State University Department of Physics and Astronomy http://galactica.pa.msu.edu/~gmeece
_______________________________________________ yt-users mailing list yt-users@lists.spacepope.org http://lists.spacepope.org/listinfo.cgi/yt-users-spacepope.org
participants (3)
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Greg Meece
-
Nathan Goldbaum
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藤田あき美*