Re: [yt-users] cutting plane not working or changed
Yes, using a conda environment should work. It's up to you how you want to
manage your install.
The nightly conda builds might be useful for this purpose:
http://yt-project.org/doc/installing.html#installing-yt-using-anaconda
On Thu, Mar 16, 2017 at 7:55 AM Slavin, Jonathan
Hi Nathan,
As you can probably tell, our e-mails of yesterday crossed.
I am willing to use the development branch of yt, though I'd prefer if I could use it alongside the stable branch instead of replacing it. I currently use anaconda. I suppose the way to go about that would be to create a new environment. Maybe this is the motivation I need to finally move to python 3.x. Any suggestions?
Jon
On Wed, Mar 15, 2017 at 5:06 PM,
wrote: Date: Wed, 15 Mar 2017 13:42:36 -0500 From: Nathan Goldbaum
To: Discussion of the yt analysis package Subject: Re: [yt-users] cutting plane not working or changed Message-ID: < CAJXewOkmpm6U9XpeDu+Xgjf4xTLBig_4Ery1tPetKi4ThPkzYA@mail.gmail.com> Content-Type: text/plain; charset="utf-8" Ah, apologies for not checking how yt behaves on a stable release. I'm able to reproduce the behavior you're seeing on yt 3.3.5. It looks like this behavior doesn't manifest itself on the yt branch, so it looks like some changes we've made have "fixed" this since we branched off for yt 3.4 last summer. I suspect this has something to do with the pixelizers being rewritten to use compositing but I'd need to check in detail with hg bisect to be sure.
Can you try testing out the development version of yt? You should be able to build yt from source by uninstalling your current version of yt, cloning the repository, checking out the "yt" branch, and running "python setup.py develop". See this page for more details:
http://yt-project.org/docs/dev/installing.html#installing-yt-using-pip-or-fr...
Is the new behavior (wtihout the NaNs) what you expect?
I might try to backport this to the stable branch, but given that a lot
of
code has changed in the pixelizers it might be difficult to backport just this fix. Would you be ok with running on the development branch for now? I'd ideally like to get yt 3.4.0 out the door by this summer.
-- ________________________________________________________ Jonathan D. Slavin Harvard-Smithsonian CfA jslavin@cfa.harvard.edu 60 Garden Street, MS 83 phone: (617) 496-7981 Cambridge, MA 02138-1516 cell: (781) 363-0035 USA ________________________________________________________
Hi Nathan,
Creating a new conda environment and then installing the nightly build
version of yt worked quite nicely -- and now the slice plot works!
Thanks for your help. I hope those changes get incorporated into a
stable build relatively soon.
Best wishes,
Jon
On Thu, Mar 16, 2017 at 9:15 AM, Nathan Goldbaum
Yes, using a conda environment should work. It's up to you how you want to manage your install.
The nightly conda builds might be useful for this purpose:
http://yt-project.org/doc/installing.html#installing-yt-using-anaconda
On Thu, Mar 16, 2017 at 7:55 AM Slavin, Jonathan
wrote: Hi Nathan,
As you can probably tell, our e-mails of yesterday crossed.
I am willing to use the development branch of yt, though I'd prefer if I could use it alongside the stable branch instead of replacing it. I currently use anaconda. I suppose the way to go about that would be to create a new environment. Maybe this is the motivation I need to finally move to python 3.x. Any suggestions?
Jon
On Wed, Mar 15, 2017 at 5:06 PM,
wrote: Date: Wed, 15 Mar 2017 13:42:36 -0500 From: Nathan Goldbaum
To: Discussion of the yt analysis package Subject: Re: [yt-users] cutting plane not working or changed Message-ID:
Content-Type: text/plain; charset="utf-8" Ah, apologies for not checking how yt behaves on a stable release. I'm able to reproduce the behavior you're seeing on yt 3.3.5. It looks like this behavior doesn't manifest itself on the yt branch, so it looks like some changes we've made have "fixed" this since we branched off for yt 3.4 last summer. I suspect this has something to do with the pixelizers being rewritten to use compositing but I'd need to check in detail with hg bisect to be sure.
Can you try testing out the development version of yt? You should be able to build yt from source by uninstalling your current version of yt, cloning the repository, checking out the "yt" branch, and running "python setup.py develop". See this page for more details:
http://yt-project.org/docs/dev/installing.html#installing-yt-using-pip-or-fr...
Is the new behavior (wtihout the NaNs) what you expect?
I might try to backport this to the stable branch, but given that a lot of code has changed in the pixelizers it might be difficult to backport just this fix. Would you be ok with running on the development branch for now? I'd ideally like to get yt 3.4.0 out the door by this summer.
-- ________________________________________________________ Jonathan D. Slavin Harvard-Smithsonian CfA jslavin@cfa.harvard.edu 60 Garden Street, MS 83 phone: (617) 496-7981 Cambridge, MA 02138-1516 cell: (781) 363-0035 USA ________________________________________________________
-- ________________________________________________________ Jonathan D. Slavin Harvard-Smithsonian CfA jslavin@cfa.harvard.edu 60 Garden Street, MS 83 phone: (617) 496-7981 Cambridge, MA 02138-1516 cell: (781) 363-0035 USA ________________________________________________________
participants (2)
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Nathan Goldbaum
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Slavin, Jonathan