Hello, I'm trying t install yt-dark and my yt version is 3.2.1 and the error is the folllowing: cythonc:> build/src.linux-x86_64-2.7/yt/utilities/lib/ContourFinding.c /home/guidomunoz/yt-x86_64/lib/python2.7/site-packages/Cython-0.22-py2.7-linux-x86_64.egg/Cython/Compiler/Main.py:514: UserWarning: got unknown compilation option, please remove: language warnings.warn(message) Error compiling Cython file: ------------------------------------------------------------ ... cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:55:23: Non-extern C function 'contour_union' declared but not defined Error compiling Cython file: ------------------------------------------------------------ ... np.int64_t join_id CandidateContour *next cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:53:24: Non-extern C function 'contour_delete' declared but not defined Error compiling Cython file: ------------------------------------------------------------ ... cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) cdef int candidate_contains(CandidateContour *first, np.int64_t contour_id, np.int64_t join_id = ?) cdef CandidateContour *candidate_add(CandidateContour *first, ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:59:22: Non-extern C function 'candidate_add' declared but not defined Error compiling Cython file: ------------------------------------------------------------ ... cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) cdef int candidate_contains(CandidateContour *first, ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:56:27: Non-extern C function 'candidate_contains' declared but not defined Error compiling Cython file: ------------------------------------------------------------ ... CandidateContour *next cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:54:15: Non-extern C function 'contour_find' declared but not defined Error compiling Cython file: ------------------------------------------------------------ ... cdef struct CandidateContour: np.int64_t contour_id np.int64_t join_id CandidateContour *next cdef ContourID *contour_create(np.int64_t contour_id, ^ ------------------------------------------------------------ /home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:51:15: Non-extern C function 'contour_create' declared but not defined error: 6 errors while compiling 'yt/utilities/lib/ContourFinding.pyx' with Cython How Can I solve it? Thanks, -- Guido
Hi Guido,
I think yt-dark has been deprecated, and all of the functionality
brought into mainline yt. Can you check that?
On Thu, Nov 26, 2015 at 7:54 AM, Guido granda muñoz
Hello,
I'm trying t install yt-dark and my yt version is 3.2.1 and the error is the folllowing:
cythonc:> build/src.linux-x86_64-2.7/yt/utilities/lib/ContourFinding.c /home/guidomunoz/yt-x86_64/lib/python2.7/site-packages/Cython-0.22-py2.7-linux-x86_64.egg/Cython/Compiler/Main.py:514: UserWarning: got unknown compilation option, please remove: language warnings.warn(message)
Error compiling Cython file: ------------------------------------------------------------ ...
cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:55:23: Non-extern C function 'contour_union' declared but not defined
Error compiling Cython file: ------------------------------------------------------------ ... np.int64_t join_id CandidateContour *next
cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:53:24: Non-extern C function 'contour_delete' declared but not defined
Error compiling Cython file: ------------------------------------------------------------ ... cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) cdef int candidate_contains(CandidateContour *first, np.int64_t contour_id, np.int64_t join_id = ?) cdef CandidateContour *candidate_add(CandidateContour *first, ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:59:22: Non-extern C function 'candidate_add' declared but not defined
Error compiling Cython file: ------------------------------------------------------------ ... cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) cdef void contour_union(ContourID *node1, ContourID *node2) cdef int candidate_contains(CandidateContour *first, ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:56:27: Non-extern C function 'candidate_contains' declared but not defined
Error compiling Cython file: ------------------------------------------------------------ ... CandidateContour *next
cdef ContourID *contour_create(np.int64_t contour_id, ContourID *prev = ?) cdef void contour_delete(ContourID *node) cdef ContourID *contour_find(ContourID *node) ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:54:15: Non-extern C function 'contour_find' declared but not defined
Error compiling Cython file: ------------------------------------------------------------ ... cdef struct CandidateContour: np.int64_t contour_id np.int64_t join_id CandidateContour *next
cdef ContourID *contour_create(np.int64_t contour_id, ^ ------------------------------------------------------------
/home/guidomunoz/yt-x86_64/src/yt-hg/yt/utilities/lib/ContourFinding.pxd:51:15: Non-extern C function 'contour_create' declared but not defined error: 6 errors while compiling 'yt/utilities/lib/ContourFinding.pyx' with Cython
How Can I solve it?
Thanks,
-- Guido
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Guido granda muñoz
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Matthew Turk