[Chicago] Perl Follow-up

[Salomon Elizondo]

ask the experts at irc://freenode.net/bioperl and more info at
http://www.open-bio.org/wiki/Main_Page



On Sat, Mar 13, 2010 at 12:47 PM, Salomon Elizondo <selizondo at gmail.com> wrote:
> I would suggest you reconsider what your end goal is, because slurping
> a file in O(1) or O(n) isn't it. Search on CPAN for existing DNA
> sequence modules related to your specific domain problem. For starters
> look into http://search.cpan.org/~cjfields/BioPerl-1.6.1/
>
> good luck
>
>
> On Sat, Mar 13, 2010 at 12:07 PM, Clyde Forrester
> <clydeforrester at gmail.com> wrote:
>> The sort of thing you suggest is the motive for this program.
> ...
>> The point is that with 8GB of memory, and a well focussed goal, doing it all
>> in-memory is now quite feasible.
>>
> ....
>