[Neuroimaging] Mac OSX 10.6.8 problem

[C.P. Rockel]

Ok, that didn't seem to quite work either.  It seems like there is a crazy
amount of errors, which I can send you if that would help.  I uninstalled
XCode beforehand, btw.

Would I need to re-install Anaconda now that the Kenneth Reitz compiler is
in place, perhaps?

Thanks,

C

On Tue, Dec 15, 2015 at 6:41 PM, Ariel Rokem <arokem at gmail.com> wrote:

> Hmm. Maybe this one is the right for you?
>
> https://github.com/kennethreitz/osx-gcc-installer
>
> (See also:
> http://stackoverflow.com/questions/4360110/installing-gcc-to-mac-os-x-leopard-without-installing-xcode
> )
>
>
>
> On Tue, Dec 15, 2015 at 3:35 PM, C.P. Rockel <rockelcp at mcmaster.ca> wrote:
>
>> I tried to update XCode, but it wouldn't let me since my OS is only
>> 10.6.8.  :(
>>
>> I'm not in the mood to update my OS at this point in my PhD...
>>
>> My XCode is version is 3.2.6, and it doesn't have the Downloads option of
>> which you speak.
>>
>> Are there any substitutes that you can think of?
>>
>> Cheers,
>>
>> Conrad
>>
>> On Tue, Dec 15, 2015 at 6:23 PM, Ariel Rokem <arokem at gmail.com> wrote:
>>
>>> Sorry for doing this step-by-step, but did you also install the command
>>> line developer tools?
>>>
>>>
>>> http://apple.stackexchange.com/questions/48099/gcc-not-found-but-xcode-is-installed
>>>
>>>  (occurs to me this needs better explanation in our documentation...)
>>>
>>> On Tue, Dec 15, 2015 at 3:18 PM, C.P. Rockel <rockelcp at mcmaster.ca>
>>> wrote:
>>>
>>>> Hi Ariel,
>>>>
>>>> when I type 'gcc' I get "command not found".  The rest of the commands
>>>> did nothing, and I got a similar error when trying to pip install dipy.
>>>>
>>>> I know I have XCode, because I am looking at its icon on my doc.  Hmmm,
>>>> any chance that I don't have the right XCode?  How can I test this?
>>>>
>>>> Thanks,
>>>>
>>>> Conrad
>>>>
>>>> On Tue, Dec 15, 2015 at 6:08 PM, Ariel Rokem <arokem at gmail.com> wrote:
>>>>
>>>>> Hi Conrad,
>>>>>
>>>>> Looks like pip is not managing to find your compiler, though if you
>>>>> have installed XCode that should be in place.
>>>>>
>>>>> What do you get when you type "gcc" at the command line?
>>>>>
>>>>> Assuming that indicates that the shell can find your compiler -- you
>>>>> should get a message indicating that the compiler couldn't find any input
>>>>> files, or something to that nature -- does typing (as suggested here:
>>>>> http://stackoverflow.com/questions/21193936/getting-errors-when-trying-to-install-matplotlib-and-numpy-using-pip
>>>>> ):
>>>>>
>>>>> export CC=gcc
>>>>>
>>>>> and then running:
>>>>>
>>>>> pip install dipy
>>>>>
>>>>> do the trick for you?
>>>>>
>>>>> Cheers,
>>>>>
>>>>> Ariel
>>>>>
>>>>> On Tue, Dec 15, 2015 at 2:55 PM, C.P. Rockel <rockelcp at mcmaster.ca>
>>>>> wrote:
>>>>>
>>>>>> Hi folks,
>>>>>>
>>>>>> I am brand new to Python, and I am having difficulties installing
>>>>>> Dipy onto my Mac (OSX 10.6.8).  I already had X-code, and I just downloaded
>>>>>> and set up Anaconda3-2.4.1-MacOSX-x86_64.sh.  I tried "pipping" all
>>>>>> of the dependencies as per the Dipy website, and it said that this packages
>>>>>> were already 'satisfied'.
>>>>>>
>>>>>> However, when I then 'pip install dipy', I get errors such as:
>>>>>>
>>>>>>   SystemError: Cannot locate working compiler
>>>>>>
>>>>>>   ----------------------------------------
>>>>>>   Failed building wheel for dipy
>>>>>> Failed to build dipy
>>>>>>
>>>>>> ... AND...
>>>>>>
>>>>>> Command "/Applications/anaconda3/bin/python3 -c "import setuptools,
>>>>>> tokenize;__file__='/private/var/folders/5p/5pdhhqwBGJCf2rrSB7PRn++++TQ/-Tmp-/pip-build-4zbiedwj/dipy/setup.py';exec(compile(getattr(tokenize,
>>>>>> 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))"
>>>>>> install --record
>>>>>> /var/folders/5p/5pdhhqwBGJCf2rrSB7PRn++++TQ/-Tmp-/pip-l7x7k8y9-record/install-record.txt
>>>>>> --single-version-externally-managed --compile" failed with error code 1 in
>>>>>> /private/var/folders/5p/5pdhhqwBGJCf2rrSB7PRn++++TQ/-Tmp-/pip-build-4zbiedwj/dipy
>>>>>>
>>>>>> As I'm not familiar with the Python environment, I'm not quite sure
>>>>>> where to start troubleshooting.
>>>>>>
>>>>>> Does anyone have any suggestions?
>>>>>>
>>>>>> Thanks,
>>>>>>
>>>>>> Conrad
>>>>>>
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>>>>>>
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