[Neuroimaging] [pysurfer] making background brain more transparent

Michael Waskom mwaskom at stanford.edu
Fri Jul 31 16:54:48 CEST 2015


Hi Kristie,

I think I'm a bit confused about your question. What do you mean make it
*more* transparent? As far as I know, the brain geometry is drawn at full
opacity so I might not understand what you are trying to do.

Best,
Michael

On Fri, Jul 31, 2015 at 3:00 AM, Kirstie Whitaker <kw401 at cam.ac.uk> wrote:

> Hi everyone,
>
> I'd like to make the background brain in pysurfer a little more
> transparent, so I'm looking for an "alpha" flag or something similar. I
> don't think this yet exists according to the documentation on changing
> the curvature color scheme
> <http://pysurfer.github.io/documentation/custom_viz.html#changing-the-curvature-color-scheme>
> but I wonder if anyone has a hack that I could implement?
>
> An alternative to the alpha parameter would be to create a fifth
> (personalised) color scheme perhaps?
>
> Thanks!
> (This is also a question on neurostars.org <http://neurostars.org/p/3315/>
> if anyone wants to answer there instead!)
>
> Kx
>
> --
> Kirstie Whitaker, PhD
> Research Associate
>
> Department of Psychiatry
> University of Cambridge
>
> *Mailing Address*
> Brain Mapping Unit
> Department of Psychiatry
> Sir William Hardy Building
> Downing Street
> Cambridge CB2 3EB
>
> *Phone: *+44 7583 535 307
> *Website:* www.kirstiewhitaker.com
>
>
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>
>
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