[Neuroimaging] dipy model fit question

[Eleftherios Garyfallidis]

The fitting cannot reduce the size of the image. Maybe you used median_otsu
with autocrop True.

On Sun, May 14, 2017 at 8:31 PM Ariel Rokem <arokem at gmail.com> wrote:

> Hi Joe,
>
> Would you mind posting the code that you ran? I am not sure that I
> understand what you mean by "the background is clipped".
>
> Thanks!
>
> Ariel
>
> On Fri, May 12, 2017 at 9:16 AM, Joe Necus (PGR) <J.Necus2 at newcastle.ac.uk
> > wrote:
>
>> Hello,
>>
>>
>> I am just starting out with dipy and have a simple question.
>>
>>
>> After generating my mask and fitting a tensort model, the FA image which
>> I obtain is reduced in size from the original image (as the background is
>> clipped).
>>
>>
>> I would like to obtain the fa map back in the original data shape, is
>> this possible?
>>
>>
>> Thanks,
>>
>> Joe
>>
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>>
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