[Neuroimaging] non linear deformation

Matthew McCormick matthew.m.mccormick at gmail.com
Wed Sep 19 09:39:31 EDT 2018

Hi Romain,

ITK can help with this task:

  python -m pip install --upgrade pip
  python -m pip install itk


  conda -c conda-forge install itk

There are many transforms available, described here:



On Wed, Sep 19, 2018 at 9:26 AM valabregue <romain.valabregue at upmc.fr>

> Dear all
> Can anyone point me out some python library to apply non linear
> deformation to the image ?
> This is for data augmentation so I do not need to do a non linear
> registration, but just a way to apply a random smooth deformation field.
> Is there in nibabel support for reading deformation field (from spm or
> ants) and then to apply it ?
> Many thanks
> Romain
> _______________________________________________
> Neuroimaging mailing list
> Neuroimaging at python.org
> https://mail.python.org/mailman/listinfo/neuroimaging
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.python.org/pipermail/neuroimaging/attachments/20180919/6399a025/attachment.html>

More information about the Neuroimaging mailing list