[Neuroimaging] [ANN] MNE-Python 0.20
Alexandre Gramfort
alexandre.gramfort at inria.fr
Sat Mar 28 04:47:20 EDT 2020
Hi,
First we hope that you’re safe in these troubled times.
We are pleased to announce the new 0.20 release of MNE-Python (
https://mne.tools/ <https://mne.tools/stable/index.html>)
A few highlights
============
-
PyVista 0.24 is now available for 3D plotting (alternative to mayavi).
This is a big step forward for source space data visualization that allows
users to explore time interactively, pick vertices to view their time
activation courses, (auto-)adjust color scales, etc. To use it, `pip
install -U pyvista` and then in your Python script do
`mne.viz.set_3d_backend(‘pyvista’)`. You should then be good to go: Simply
plot your source-time course data via stc.plot(), and the improved
interface should open automatically!
-
Automatic estimation of head motion from cHPI MEG coils in the mne.chpi
namespace.
-
Automatic detection of bad (flat or overly noisy) MEG channels via the
new find_bad_channels_maxwell function
-
New topography plotting code to take into account head position and deal
properly with channel subsets
-
New function and tutorial for estimating source-power from covariance
matrices using MNE (as commonly done with a beamformer).
-
Extensive improvements to the narrative documentation
https://mne.tools/stable/auto_tutorials/index.html
Notable API changes
================
-
Sensors shown in relationship to a head circle, as in topomap plotting,
are now systematically converted from their given physical locations. Using
a static layout (such as those typically used with topo plots) has been
deprecated.
For a full list of improvements and API changes, see:
https://mne.tools/stable/whats_new.html#version-0-20
To install the latest release the following command should do the job:
pip install --upgrade --user mne
As usual we welcome your bug reports, feature requests, critiques, and
contributions.
Some links:
- https://github.com/mne-tools/mne-python (code + readme on how to install)
- <http://martinos.org/mne/stable/>https://mne.tools/
<https://mne.tools/stable/index.html> (full MNE documentation)
Follow us on Twitter: https://twitter.com/mne_news
Stay safe and take care !
Regards,
The MNE-Python developers
People who contributed to this release (in alphabetical order):
-
Adam Li
-
Adonay Nunes
-
Alex Rockhill
-
Alexandre Gramfort
-
Ariel Rokem
-
Britta Westner
-
Carlos de la Torre
-
Christian Brodbeck
-
Christian O’Reilly
-
Chun-Hui Li
-
Clemens Brunner
-
Daniel McCloy
-
Demetres Kostas
-
Denis A. Engemann
-
Dmitrii Altukhov
-
Dominik Welke
-
Eric Larson
-
Ezequiel Mikulan
-
Fahimeh Mamashli
-
Fede Raimondo
-
Fu-Te Wong
-
Geoff Brookshire
-
Guillaume Favelier
-
Henrich Kolkhorst
-
Joan Massich
-
José C. García Alanis
-
Jussi Nurminen
-
Kaisu Lankinen
-
Luke Bloy
-
Mainak Jas
-
Marijn van Vliet
-
Mathurin Massias
-
Mikolaj Magnuski
-
Mohamed Sherif
-
Mohammad Daneshzand
-
Nataliia Kozhemiako
-
Nicolas Barascud
-
Nicolas Legrand
-
Olaf Hauk
-
Padma Sundaram
-
Ramiro Gatti
-
Richard Höchenberger
-
Robert Luke
-
Robert Oostenveld
-
Sebastian Major
-
Sophie Herbst
-
Stefan Appelhoff
-
Stefan Repplinger
-
Thomas Hartmann
-
Victor Férat
-
Yu-Han Luo
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