<div dir="ltr">Indeed, thanks a lot !<br></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Tue, Oct 20, 2020 at 12:30 PM bthirion <<a href="mailto:bertrand.thirion@inria.fr">bertrand.thirion@inria.fr</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div>
<div>Thx Chris !</div>
<div>B</div>
<div><br>
</div>
<div>On 20/10/2020 15:55, Christopher
Markiewicz wrote:<br>
</div>
<blockquote type="cite">
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Hi all,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
NiBabel 3.2 is released today. Python 3.6+ and Numpy 1.14+ are
supported in this version. Please cite this version with
doi:10.5281/zenodo.4109791 (<a href="https://doi.org/10.5281/zenodo.4109791" id="gmail-m_2082848486910545160LPlnk379238" target="_blank">https://doi.org/10.5281/zenodo.4109791</a>).<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
This release includes two new commandline utilities: nib-roi and
nib-stats. nib-roi allows cropping and flipping images using
Python slicing syntax. nib-stats, and the Python API
nibabel.imagestats, is inspired by fslstats, and is intended to
provide common calculations on images.<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Much thanks to new contributors Jonathan Daniel, Markéta
Calábková, Carl Gauthier and Julian Klug, as well as familiar
faces who have reported bugs, submitted PRs and especially
reviewed contributions.</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
The next planned minor release series will be 4.0, which will
see some deprecations and removals, so please pay attention to
any warnings that may be popping up. Judging from this last
round, we can probably expect a release candidate around
February or March.</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
The full changelog follows.</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Best,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
Chris</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
<div>Most work on NiBabel so far has been by Matthew Brett (MB),
Chris Markiewicz (CM), Michael Hanke (MH), Marc-Alexandre Côté
(MC), Ben Cipollini (BC), Paul McCarthy (PM), Chris Cheng
(CC), Yaroslav Halchenko (YOH), Satra Ghosh (SG), Eric Larson
(EL), Demian Wassermann, Stephan Gerhard and Ross Markello
(RM).</div>
<div><br>
</div>
<div>References like "pr/298" refer to github pull request
numbers.</div>
<div><br>
</div>
<div>3.2.0 (Tuesday 20 October 2020)</div>
<div>==============================</div>
<div><br>
</div>
<div>New feature release in the 3.2.x series.</div>
<div><br>
</div>
<div>New features</div>
<div>------------</div>
<div>* ``nib-stats`` CLI tool to expose new
``nibabel.imagestats`` API. Initial implementation of volume
calculations, a la ``fslstats -V``. (pr/952) (Julian Klug,
reviewed by CM and GitHub user 0rC0)</div>
<div>* ``nib-roi`` CLI tool to crop images and/or flip axes
(pr/947) (CM, reviewed by Chris Cheng and Mathias Goncalves)</div>
<div>* Parser for Siemens "ASCCONV" text format (pr/896)
(Brendan Moloney and MB, reviewed by CM)</div>
<div><br>
</div>
<div>Enhancements</div>
<div>------------</div>
<div>* Drop confusing mention of ``img.to_filename()`` in
getting started guide (pr/946) (Fernando Pérez-Garcia,
reviewed by MB, CM)</div>
<div>* Implement ``to_bytes()``/``from_bytes()`` methods for
``Cifti2Image`` (pr/938) (CM, reviewed by Mathias Goncalves)</div>
<div>* Clean up of DICOM documentation (pr/910) (Jonathan
Daniel, reviewed by MB)</div>
<div><br>
</div>
<div>Bug fixes</div>
<div>---------</div>
<div>* Use canvas manager API to set title in ``OrthoSlicer3D``
(pr/958) (EL, reviewed by CM)</div>
<div>* Record units as seconds parrec2nii; previously set TR to
seconds but retained msec units (pr/931) (CM, reviewed by MB)</div>
<div>* Reflect on-disk dimensions in NIfTI-2 view of CIFTI-2
images (pr/930) (Mathias Goncalves and CM)</div>
<div>* Fix outdated Python 2 and Sympy code in DICOM derivations
(pr/911) (MB, reviewed by CM)</div>
<div>* Change string with invalid escape to raw string (pr/909)
(EL, reviewed by MB)</div>
<div><br>
</div>
<div>Maintenance</div>
<div>-----------</div>
<div>* Fix typo in docs (pr/955) (Carl Gauthier, reviewed by CM)</div>
<div>* Purge nose from nisext tests (pr/934) (Markéta Calábková,
reviewed by CM)</div>
<div>* Suppress expected warnings in tests (pr/949) (CM,
reviewed by Dorota Jarecka)</div>
<div>* Various cleanups and modernizations (pr/916, pr/917,
pr/918, pr/919) (Jonathan Daniel, reviewed by CM)</div>
<div>* SVG logo for improved appearance in with zooming (pr/914)
(Jonathan Daniel, reviewed by CM)</div>
<div><br>
</div>
<div>API changes and deprecations</div>
<div>----------------------------</div>
<div>* Drop support for Numpy < 1.13 (pr/922) (CM)</div>
<div>* Warn on use of ``onetime.setattr_on_read``, which has
been a deprecated alias of ``auto_attr`` (pr/948) (CM,
reviewed by Ariel Rokem)</div>
<br>
</div>
<div>
<div id="gmail-m_2082848486910545160Signature">
<div>
<div id="gmail-m_2082848486910545160divtagdefaultwrapper" dir="ltr" style="font-size:12pt;color:rgb(0,0,0);font-family:Calibri,Arial,Helvetica,sans-serif">
<p style="margin-top:0px;margin-bottom:0px">-- </p>
<p style="margin-top:0px;margin-bottom:0px">Chris
Markiewicz</p>
<p style="margin-top:0px;margin-bottom:0px">Center for
Reproducible Neuroscience</p>
<p style="margin-top:0px;margin-bottom:0px">Stanford
University</p>
</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif;font-size:12pt;color:rgb(0,0,0)">
<br>
</div>
</div>
</div>
</div>
<br>
<fieldset></fieldset>
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