<div dir="ltr">Thank you all for your encouragement.<div><br><div>DIPY and Neuroimaging in Python overall has gone a long way.<br></div><div><br></div><div>It would be great to have a chat with representative devs from all projects </div><div>to summarize new developments across NIPY.org.</div><div><br></div><div>Possibly there is plenty of code and APIs to share. </div><div><br></div><div><div><div><div>Have a wonderful weekend!<br></div></div></div><div>Eleftherios</div><div><br></div></div></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sat, May 8, 2021 at 3:53 PM JB Poline <<a href="mailto:jbpoline@gmail.com">jbpoline@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div>
<div dir="ltr">
<div>Ditto !!!</div>
<div>JB<br>
</div>
</div>
<br>
<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Sat, May 8, 2021 at 5:53 AM Alexandre Gramfort <<a href="mailto:alexandre.gramfort@inria.fr" target="_blank">alexandre.gramfort@inria.fr</a>> wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div dir="ltr">excellent ! congrats Dipy team !
<div><br>
</div>
<div>Alex</div>
<div><br>
</div>
<div>PS : mne-python uses dipy internally for its 3D registration. Its robust packaging and its pythonic API</div>
<div>makes it a pleasure!</div>
<div><br>
</div>
<div><br>
</div>
</div>
<br>
<div class="gmail_quote">
<div dir="ltr" class="gmail_attr">On Fri, May 7, 2021 at 11:04 PM Christopher Markiewicz <<a href="mailto:markiewicz@stanford.edu" target="_blank">markiewicz@stanford.edu</a>> wrote:<br>
</div>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
Nice work, dipy team!<br>
<br>
Chris<br>
<br>
________________________________________<br>
From: Neuroimaging <neuroimaging-bounces+markiewicz=<a href="mailto:stanford.edu@python.org" target="_blank">stanford.edu@python.org</a>> on behalf of bthirion <<a href="mailto:bertrand.thirion@inria.fr" target="_blank">bertrand.thirion@inria.fr</a>><br>
Sent: Friday, May 7, 2021 3:21 PM<br>
To: <a href="mailto:neuroimaging@python.org" target="_blank">neuroimaging@python.org</a><br>
Subject: Re: [Neuroimaging] ANN: DIPY 1.4.1 Released!<br>
<br>
Congrats !<br>
Bertrand<br>
<br>
On 07/05/2021 21:01, Satrajit Ghosh wrote:<br>
congrats dipy folks.<br>
<br>
cheers,<br>
<br>
satra<br>
<br>
On Fri, May 7, 2021 at 1:15 PM Eleftherios Garyfallidis <<a href="mailto:garyfallidis@gmail.com" target="_blank">garyfallidis@gmail.com</a><mailto:<a href="mailto:garyfallidis@gmail.com" target="_blank">garyfallidis@gmail.com</a>>> wrote:<br>
<br>
Hello all,<br>
<br>
<br>
We are happy to announce two new releases of DIPY: DIPY 1.4.0 and 1.4.1 are out!<br>
<br>
<br>
Please support us by citing DIPY in your papers using the following DOI: 10.3389/fninf.2014.00008 <<a href="https://www.ncbi.nlm.nih.gov/pubmed/24600385" rel="noreferrer" target="_blank">https://www.ncbi.nlm.nih.gov/pubmed/24600385</a>><br>
<br>
<br>
DIPY 1.4.1 (Thursday, 6 May 2021) & 1.4.0 (Saturday, 13 March, 2021)<br>
<br>
* Release 1.4.1 received contributions from 11 developers (the full release notes are at:
<a href="https://dipy.org/documentation/1.4.1./release_notes/release1.4.1/" rel="noreferrer" target="_blank">
https://dipy.org/documentation/1.4.1./release_notes/release1.4.1/</a>).<br>
<br>
* Release 1.4.0 received contributions from 8 developers (the full release notes are at:
<a href="https://dipy.org/documentation/1.4.0./release_notes/release1.4/" rel="noreferrer" target="_blank">
https://dipy.org/documentation/1.4.0./release_notes/release1.4/</a>).<br>
<br>
<br>
Thank you all for your contributions and feedback!<br>
<br>
<br>
Please click here<<a href="https://dipy.org/documentation/1.4.1./api_changes/" rel="noreferrer" target="_blank">https://dipy.org/documentation/1.4.1./api_changes/</a>> to check 1.4.1 API changes.<br>
<br>
Please click here<<a href="https://dipy.org/documentation/1.4.0./api_changes/" rel="noreferrer" target="_blank">https://dipy.org/documentation/1.4.0./api_changes/</a>> to check 1.4.0 API changes.<br>
<br>
<br>
Highlights of 1.4.1 release include:<br>
<br>
* New surface seeding module for tractography named mesh.<br>
<br>
* Patch2Self and its documentation updated.<br>
<br>
* BUAN and RecoBundles documentation updated.<br>
<br>
* Standardization and improvement of the multiprocessing / multithreading rules.<br>
<br>
* Community and governance information added.<br>
<br>
* Large update of Cython code in compliance with the last standard.<br>
<br>
* Large documentation update.<br>
<br>
* Closed 61 issues and merged 28 pull requests.<br>
<br>
Highlights of 1.4.0 release include:<br>
<br>
<br>
* New self-supervised denoising algorithm Patch2Self added.<br>
<br>
* Response function refactored and clarified.<br>
<br>
* B-tensor allowed with response functions.<br>
<br>
* Large Command Line Interface (CLI) documentation updated.<br>
<br>
* Public API for Registration added.<br>
<br>
* Large documentation update.<br>
<br>
* Closed 47 issues and merged 19 pull requests.<br>
<br>
<br>
To upgrade or install<<a href="http://dipy.org/release0.10.html" rel="noreferrer" target="_blank">http://dipy.org/release0.10.html</a>> DIPY<br>
<br>
<br>
Run the following command in your terminal: <<a href="http://dipy.org/release0.10.html" rel="noreferrer" target="_blank">http://dipy.org/release0.10.html</a>><br>
<br>
<br>
pip install --upgrade dipy<br>
<br>
<br>
or<br>
<br>
<br>
conda install -c conda-forge dipy<br>
<br>
<br>
This version of DIPY depends on nibabel (3.0.0+).<br>
<br>
For visualization you need FURY (0.7.0+).<br>
<br>
<br>
Questions or suggestions?<br>
<br>
<br>
<br>
For any questions go to <a href="https://dipy.org" rel="noreferrer" target="_blank">
https://dipy.org</a><<a href="https://dipy.org/" rel="noreferrer" target="_blank">https://dipy.org/</a>>, or send an e-mail to
<a href="mailto:dipy@python.org" target="_blank">dipy@python.org</a><mailto:<a href="mailto:neuroimaging@python.org" target="_blank">neuroimaging@python.org</a>><br>
<br>
We also have an instant messaging service and chat room available at <a href="https://gitter.im/dipy/dipy" rel="noreferrer" target="_blank">
https://gitter.im/dipy/dipy</a><br>
<br>
Finally, a new forum is available at <a href="https://github.com/dipy/dipy/discussions" rel="noreferrer" target="_blank">
https://github.com/dipy/dipy/discussions</a><br>
<br>
<br>
Have a wonderful time using the latest release.<br>
<br>
<br>
On behalf of the DIPY developers,<br>
<br>
Eleftherios Garyfallidis, Ariel Rokem, Serge Koudoro<br>
<br>
<a href="https://dipy.org/contributors" rel="noreferrer" target="_blank">https://dipy.org/contributors</a><<a href="https://dipy.org/contributors/" rel="noreferrer" target="_blank">https://dipy.org/contributors/</a>><br>
<br>
<br>
<br>
_______________________________________________<br>
Neuroimaging mailing list<br>
<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a><mailto:<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a>><br>
<a href="https://mail.python.org/mailman/listinfo/neuroimaging" rel="noreferrer" target="_blank">https://mail.python.org/mailman/listinfo/neuroimaging</a><br>
<br>
<br>
<br>
_______________________________________________<br>
Neuroimaging mailing list<br>
<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a><mailto:<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a>><br>
<a href="https://mail.python.org/mailman/listinfo/neuroimaging" rel="noreferrer" target="_blank">https://mail.python.org/mailman/listinfo/neuroimaging</a><br>
<br>
<br>
_______________________________________________<br>
Neuroimaging mailing list<br>
<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a><br>
<a href="https://mail.python.org/mailman/listinfo/neuroimaging" rel="noreferrer" target="_blank">https://mail.python.org/mailman/listinfo/neuroimaging</a><br>
</blockquote>
</div>
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Neuroimaging mailing list<br>
<a href="mailto:Neuroimaging@python.org" target="_blank">Neuroimaging@python.org</a><br>
<a href="https://mail.python.org/mailman/listinfo/neuroimaging" rel="noreferrer" target="_blank">https://mail.python.org/mailman/listinfo/neuroimaging</a><br>
</blockquote>
</div>
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</blockquote></div>