[Numpy-discussion] building numpy with atlas on ubuntu edgy
Christian K
ckkart at hoc.net
Sat Apr 14 10:14:19 EDT 2007
Robert Kern wrote:
> Christian K wrote:
>> Hi,
>> I'm trying to build numpy from svn on ubuntu edgy with atlas provided by ubuntu
>> package atlas3-sse2-dev which contains:
>>
>> /usr
>> /usr/lib
>> /usr/lib/sse2
>> /usr/lib/sse2/libatlas.a
>> /usr/lib/sse2/libcblas.a
>> /usr/lib/sse2/libf77blas.a
>> /usr/lib/sse2/liblapack_atlas.a
>> /usr/lib/atlas
>> /usr/lib/atlas/sse2
>> /usr/lib/atlas/sse2/libblas.a
>> /usr/lib/atlas/sse2/liblapack.a
>> /usr/share
>> /usr/share/doc
>> /usr/share/doc/atlas3-sse2-dev
>> /usr/share/doc/atlas3-sse2-dev/copyright
>> /usr/share/doc/atlas3-sse2-dev/changelog.Debian.gz
>> /usr/lib/sse2/libatlas.so
>> /usr/lib/sse2/libcblas.so
>> /usr/lib/sse2/libf77blas.so
>> /usr/lib/sse2/liblapack_atlas.so
>> /usr/lib/atlas/sse2/libblas.so
>> /usr/lib/atlas/sse2/liblapack.so
>>
>> I tried both with and without a site.cfg:
>>
>>
>> [DEFAULT]
>> library_dirs = /usr/lib/sse2
>> include_dirs = /usr/include
>>
>> [blas_opt]
>> libraries = f77blas, cblas, atlas
>>
>> [lapack_opt]
>> libraries = lapack, f77blas, cblas, atlas
>
>> Confusingly lapack_atlas resides in /usr/lib but even though setup.py looks for
>> it in that place it reports 'not found'.
>>
>> What should I try next?
>
> Change this:
>
> [lapack_opt]
> libraries = lapack, f77blas, cblas, atlas
>
> to this:
>
> [lapack_opt]
> libraries = lapack_atlas, f77blas, cblas, atlas
>
Thanks, but that didn't help:
atlas_info:
libraries lapack not found in /usr/lib/sse2
libraries f77blas,cblas,atlas not found in /usr/lib/atlas
libraries lapack_atlas not found in /usr/lib/atlas
libraries lapack not found in /usr/lib/sse2
libraries f77blas,cblas,atlas not found in /usr/lib
libraries lapack_atlas not found in /usr/lib
numpy.distutils.system_info.atlas_info
/media/hda6/home/ck/prog/scipy/numpy/numpy/distutils/system_info.py:903:
UserWarning:
*********************************************************************
Could not find lapack library within the ATLAS installation.
*********************************************************************
warnings.warn(message)
FOUND:
libraries = ['f77blas', 'cblas', 'atlas']
library_dirs = ['/usr/lib/sse2']
language = c
define_macros = [('ATLAS_WITHOUT_LAPACK', None)]
lapack_info:
libraries lapack not found in /usr/lib/sse2
libraries lapack not found in /usr/lib
NOT AVAILABLE
Christian
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