[Numpy-discussion] still having numpy installation issues
martin djokovic
martin.djokovic at gmail.com
Mon Aug 23 15:37:54 EDT 2010
I tried to find all the numpy locations and removed them then tried....
yum install numpy
After trying for s few minutes.......got the following
Error: Cannot find a valid baseurl for repo: extras
If I install the other way using the tar file ...I still get
>>> import numpy
Traceback (most recent call last):
File "<stdin>", line 1, in ?
File "/usr/local/lib/python2.4/site-packages/numpy/__init__.py",
line 144, in ?
import fft
File "/usr/local/lib/python2.4/site-packages/numpy/fft/__init__.py",
line 4, in ?
from fftpack import *
File "/usr/local/lib/python2.4/site-packages/numpy/fft/fftpack.py",
line 28, in ?
import fftpack_lite as fftpack
ImportError: /usr/local/lib/python2.4/site-packages/numpy/fft/fftpack_lite.so:
undefined symbol: vmldCos2
I tried looking for missing libraries using...
ldd fft/fftpack_lite.so
No libraries missing......
linux-gate.so.1 => (0x0060d000)
libimf.so => /opt/intel/fc/9.1/lib/libimf.so (0x0025e000)
libm.so.6 => /lib/libm.so.6 (0x00110000)
libgcc_s.so.1 => /lib/libgcc_s.so.1 (0x00bad000)
libirc.so => /opt/intel/fc/9.1/lib/libirc.so (0x00ecc000)
libc.so.6 => /lib/libc.so.6 (0x0049c000)
libdl.so.2 => /lib/libdl.so.2 (0x008fd000)
/lib/ld-linux.so.2 (0x00243000)
checked the path to python for both root and user-made an alias in both to
refer to same python
Nothing seems to work-if you guys have any more ideas I would love to hear
them-I am stuck here amd cannot move ahead and no one in my office who can
help-so your help is much appreciated.
I am also wondering if you need to scipy or biopython to use numpy???
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