[Numpy-discussion] speeding up operations on small vectors
Skipper Seabold
jsseabold at gmail.com
Tue Oct 11 13:06:01 EDT 2011
On Tue, Oct 11, 2011 at 12:41 PM, Christoph Groth <cwg at falma.de> wrote:
> Skipper Seabold <jsseabold at gmail.com> writes:
>
>> So it's the dot function being called repeatedly on smallish arrays
>> that's the bottleneck? I've run into this as well. See this thread
>> [1].
>> (...)
>
> Thanks for the links. "tokyo" is interesting, though I fear the
> intermediate matrix size regime where it really makes a difference will
> be rather small. My concern is in really tiny vectors, where it's not
> even worth to call BLAS.
>
IIUC, it's not so much the BLAS that's helpful but avoiding the
overhead in calling numpy.dot from cython.
>> I'd be very interested to hear if you achieve a great speed-up with
>> cython+tokyo.
>
> I try to solve this problem in some way or other. I'll post here if I
> end up with something interesting.
Please do.
Skipper
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