[Numpy-discussion] numpy + MKL problems

Glen Jenness glenjenness at gmail.com
Fri Mar 16 21:00:28 EDT 2012


Dear users,
I was playing around with my numpy configuration, and it is now no longer
working.  Whenever I try to run anything with it, I get:

...MKL FATAL ERROR: /opt/intel/mkl/10.0.3.020/lib/em64t/: cannot read file
data: Is a directory

My site.cfg file is (in case it helps!):
[DEFAULT]
library_dirs = /usr/lib
include_dirs = /usr/include
[fftw]
libraries = fftw3
[mkl]
library_dirs = /opt/intel/mkl/10.0.3.020/lib/em64t
include_dirs = /opt/intel/mkl/10.0.3.020/include
mkl_libs = mkl_intel_lp64,mkl_intel_thread,mkl_core

I have followed the directions for installing it from source, and it was
working fine earlier today.  But I'm not really sure what I had changed so
it would go from working to not working.

Any advice would be appreciated!
Dr. Glen Jenness
Schmidt Group
Department of Chemistry
University of Wisconsin - Madison
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