[Numpy-discussion] Error installing numpy 1.7.1
Francesco Pacchiani
fpacchiani at hotmail.com
Sat May 4 01:05:29 EDT 2013
Hello,
I want to install numpy 1.7.1 for use with python 3.2.1 and have
been blocked by an error during the build process. My OS is Mandriva
2001. I'm installing numpy from source because python2.7 is already
installed and seems to be the default, the rpm's don't install
anything in python3.2/site-packages.
The command used is "python3 setup.py build" and below I have posted
the end of the outptut which contains the error message. I understand
it is the compilation of _capi.c that posses problems, but have not been
able to solve it. The fenv.h file is installed in different directories
/usr/include
/usr/local/src/numpy-1.7.1/numpy/core/include/numpy/fenv/fenv.h and
/usr/local/src/numpy-1.7.1/build/py3k/numpy/core/include/numpy/fenv/fenv.h
Using strace, one realizes that there is a call for
"build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so" that
generates a "No such file or directory". The end of the output of
"strace python3 setup.py build" command is posted below as well. Indeed
no such library exists, should it?
Does anybody understand the problem or have a hint to give. Thanks.
Francesco
Output after executing: python3 setup.py build
creating build/temp.linux-x86_64-3.2/numpy/lib
creating build/temp.linux-x86_64-3.2/numpy/lib/src
compile options: '-Inumpy/core/include
-Ibuild/src.linux-x86_64-3.2/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray
-Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include
-I/usr/include/python3.2mu
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/multiarray
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/umath -c'
gcc: numpy/lib/src/_compiled_base.c
gcc -pthread -shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro
-Wl,-O1 -Wl,--build-id -Wl,--enable-new-dtags
build/temp.linux-x86_64-3.2/numpy/lib/src/_compiled_base.o -L/usr/lib64
-Lbuild/temp.linux-x86_64-3.2 -lpython3.2mu -o
build/lib.linux-x86_64-3.2/numpy/lib/_compiled_base.cpython-32mu.so
building 'numpy.numarray._capi' extension
compiling C sources
C compiler: gcc -pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG
-O2 -g -frecord-gcc-switches -Wstrict-aliasing=2 -pipe -Wformat
-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector
--param=ssp-buffer-size=4 -fPIC -g -O2 -g -frecord-gcc-switches
-Wstrict-aliasing=2 -pipe -Wformat -Werror=format-security
-Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4
-fPIC -fPIC
creating build/temp.linux-x86_64-3.2/numpy/numarray
compile options: '-Inumpy/core/include
-Ibuild/src.linux-x86_64-3.2/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray
-Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include
-I/usr/include/python3.2mu
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/multiarray
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/umath -c'
gcc: numpy/numarray/_capi.c
numpy/numarray/_capi.c: In function ‘deferred_libnumarray_init’:
numpy/numarray/_capi.c:31:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_callCUFuncCore’:
numpy/numarray/_capi.c:579:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_new_cfunc’:
numpy/numarray/_capi.c:1018:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_OutputArray’:
numpy/numarray/_capi.c:1104:5: warning: passing argument 2 of ‘(int
(*)(struct PyArrayObject *, struct PyArrayObject *))*(PyArray_API +
2296u)’ from incompatible pointer type [enabled by default]
numpy/numarray/_capi.c:1104:5: note: expected ‘struct PyArrayObject *’ but argument is of type ‘struct PyObject *’
numpy/numarray/_capi.c: In function ‘NA_callStrideConvCFuncCore’:
numpy/numarray/_capi.c:2644:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_IeeeMask32’:
numpy/numarray/_capi.c:3073:5: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_IeeeMask64’:
numpy/numarray/_capi.c:3117:5: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
gcc -pthread -shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro
-Wl,-O1 -Wl,--build-id -Wl,--enable-new-dtags
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o -L/usr/lib64
-Lbuild/temp.linux-x86_64-3.2 -lpython3.2mu -o
build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `NA_checkFPErrors':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3019: undefined reference to `fetestexcept'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3026: undefined reference to `feclearexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `int_overflow_error':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:263: undefined reference to `feraiseexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_atanh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:233: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_asinh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `log'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:190: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_pow':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:207: undefined reference to `pow'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log10':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:198: undefined reference to `log10'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_round':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `ceil'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `floor'
collect2: ld returned 1 exit status
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `NA_checkFPErrors':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3019: undefined reference to `fetestexcept'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3026: undefined reference to `feclearexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `int_overflow_error':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:263: undefined reference to `feraiseexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_atanh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:233: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_asinh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `log'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:190: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_pow':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:207: undefined reference to `pow'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log10':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:198: undefined reference to `log10'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_round':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `ceil'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `floor'
collect2: ld returned 1 exit status
error: Command "gcc -pthread -shared -Wl,--as-needed
-Wl,--no-undefined -Wl,-z,relro -Wl,-O1 -Wl,--build-id
-Wl,--enable-new-dtags
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o -L/usr/lib64
-Lbuild/temp.linux-x86_64-3.2 -lpython3.2mu -o
build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so" failed
with exit status 1
Output of "strace python3 setup.py build"
stat("build/lib.linux-x86_64-3.2/numpy/core/umath_tests.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=54991, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/core/umath_tests.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=54991, ...}) = 0
stat("build/src.linux-x86_64-3.2/numpy/core/src/umath/umath_tests.c", {st_mode=S_IFREG|0644, st_size=14253, ...}) = 0
stat("build/src.linux-x86_64-3.2/numpy/core/src/umath/umath_tests.c", {st_mode=S_IFREG|0644, st_size=14253, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/core/multiarray_tests.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=56661, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/core/multiarray_tests.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=56661, ...}) = 0
stat("build/src.linux-x86_64-3.2/numpy/core/src/multiarray/multiarray_tests.c", {st_mode=S_IFREG|0644, st_size=14087, ...}) = 0
stat("build/src.linux-x86_64-3.2/numpy/core/src/multiarray/multiarray_tests.c", {st_mode=S_IFREG|0644, st_size=14087, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/lib/_compiled_base.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=100309, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/lib/_compiled_base.cpython-32mu.so", {st_mode=S_IFREG|0755, st_size=100309, ...}) = 0
stat("numpy/lib/src/_compiled_base.c", {st_mode=S_IFREG|0644, st_size=50102, ...}) = 0
stat("numpy/lib/src/_compiled_base.c", {st_mode=S_IFREG|0644, st_size=50102, ...}) = 0
stat("build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so", 0x7fff78c15920) = -1 ENOENT (No such file or directory)
write(1, "\33[39mbuilding 'numpy.numarray._c"..., 51building 'numpy.numarray._capi' extension
) = 51
write(1, "\33[39mcompiling C sources\33[0m\n", 29compiling C sources
) = 29
write(1, "\33[39mC compiler: gcc -pthread -D"..., 408C compiler: gcc
-pthread -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -O2 -g
-frecord-gcc-switches -Wstrict-aliasing=2 -pipe -Wformat
-Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector
--param=ssp-buffer-size=4 -fPIC -g -O2 -g -frecord-gcc-switches
-Wstrict-aliasing=2 -pipe -Wformat -Werror=format-security
-Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4
-fPIC -fPIC
) = 408
write(1, "\n", 1
) = 1
stat("build/temp.linux-x86_64-3.2/numpy/numarray", {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
write(1, "\33[39mcompile options: '-Inumpy/c"..., 415compile
options: '-Inumpy/core/include
-Ibuild/src.linux-x86_64-3.2/numpy/core/include/numpy
-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core
-Inumpy/core/src/npymath -Inumpy/core/src/multiarray
-Inumpy/core/src/umath -Inumpy/core/src/npysort -Inumpy/core/include
-I/usr/include/python3.2mu
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/multiarray
-Ibuild/src.linux-x86_64-3.2/numpy/core/src/umath -c'
) = 415
write(1, "\33[39mgcc: numpy/numarray/_capi.c"..., 37gcc: numpy/numarray/_capi.c
) = 37
getcwd("/usr/local/src/numpy-1.7.1/build/py3k", 1026) = 38
getcwd("/usr/local/src/numpy-1.7.1/build/py3k", 1026) = 38
open("/tmp/tmpicyzqn/npoyom", O_RDWR|O_CREAT|O_EXCL|O_NOFOLLOW, 0600) = 3
fcntl(3, F_GETFD) = 0
fcntl(3, F_SETFD, FD_CLOEXEC) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c13e48) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c13bf8) = -1 ENOTTY (Inappropriate ioctl for device)
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
close(3) = 0
open("/tmp/tmpicyzqn/w8jsoc", O_RDWR|O_CREAT|O_EXCL|O_NOFOLLOW, 0600) = 3
fcntl(3, F_GETFD) = 0
fcntl(3, F_SETFD, FD_CLOEXEC) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c13e48) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c13bf8) = -1 ENOTTY (Inappropriate ioctl for device)
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
close(3) = 0
rt_sigaction(SIGINT, {SIG_IGN, [], SA_RESTORER, 0x7f6f35d55250}, {0x7f6f363dfe70, [], SA_RESTORER, 0x7f6f35d55250}, 8) = 0
rt_sigaction(SIGQUIT, {SIG_IGN, [], SA_RESTORER, 0x7f6f35d55250}, {SIG_DFL, [], SA_RESTORER, 0x7f6f35d55250}, 8) = 0
rt_sigprocmask(SIG_BLOCK, [CHLD], [], 8) = 0
clone(child_stack=0, flags=CLONE_PARENT_SETTID|SIGCHLD, parent_tidptr=0x7fff78c1475c) = 24562
wait4(24562, numpy/numarray/_capi.c: In function ‘deferred_libnumarray_init’:
numpy/numarray/_capi.c:31:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_callCUFuncCore’:
numpy/numarray/_capi.c:579:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_new_cfunc’:
numpy/numarray/_capi.c:1018:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_OutputArray’:
numpy/numarray/_capi.c:1104:5: warning: passing argument 2 of ‘(int
(*)(struct PyArrayObject *, struct PyArrayObject *))*(PyArray_API +
2296u)’ from incompatible pointer type [enabled by default]
numpy/numarray/_capi.c:1104:5: note: expected ‘struct PyArrayObject *’ but argument is of type ‘struct PyObject *’
numpy/numarray/_capi.c: In function ‘NA_callStrideConvCFuncCore’:
numpy/numarray/_capi.c:2644:5: warning: dereferencing type-punned pointer might break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_IeeeMask32’:
numpy/numarray/_capi.c:3073:5: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
numpy/numarray/_capi.c: In function ‘NA_IeeeMask64’:
numpy/numarray/_capi.c:3117:5: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
[{WIFEXITED(s) && WEXITSTATUS(s) == 0}], 0, NULL) = 24562
rt_sigaction(SIGINT, {0x7f6f363dfe70, [], SA_RESTORER, 0x7f6f35d55250}, NULL, 8) = 0
rt_sigaction(SIGQUIT, {SIG_DFL, [], SA_RESTORER, 0x7f6f35d55250}, NULL, 8) = 0
rt_sigprocmask(SIG_SETMASK, [], NULL, 8) = 0
--- {si_signo=SIGCHLD, si_code=CLD_EXITED, si_pid=24562, si_status=0, si_utime=0, si_stime=0} (Child exited) ---
open("/tmp/tmpicyzqn/w8jsoc", O_RDONLY) = 3
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c141c8) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
read(3, "0\n", 8192) = 2
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2
read(3, "", 8192) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2
read(3, "", 8192) = 0
close(3) = 0
unlink("/tmp/tmpicyzqn/w8jsoc") = 0
open("/tmp/tmpicyzqn/npoyom", O_RDONLY) = 3
fstat(3, {st_mode=S_IFREG|0600, st_size=1514, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c141c8) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=1514, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=1514, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
read(3, "numpy/numarray/_capi.c: In funct"..., 8192) = 1514
fstat(3, {st_mode=S_IFREG|0600, st_size=1514, ...}) = 0
lseek(3, 0, SEEK_CUR) = 1514
read(3, "", 8192) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=1514, ...}) = 0
lseek(3, 0, SEEK_CUR) = 1514
read(3, "", 8192) = 0
close(3) = 0
unlink("/tmp/tmpicyzqn/npoyom") = 0
stat("build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so", 0x7fff78c15290) = -1 ENOENT (No such file or directory)
stat("build/lib.linux-x86_64-3.2/numpy/numarray", {st_mode=S_IFDIR|0755, st_size=4096, ...}) = 0
write(1, "\33[39mgcc -pthread -shared -Wl,--"..., 299gcc -pthread
-shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro -Wl,-O1
-Wl,--build-id -Wl,--enable-new-dtags
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o -L/usr/lib64
-Lbuild/temp.linux-x86_64-3.2 -lpython3.2mu -o
build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so
) = 299
getcwd("/usr/local/src/numpy-1.7.1/build/py3k", 1026) = 38
getcwd("/usr/local/src/numpy-1.7.1/build/py3k", 1026) = 38
open("/tmp/tmpicyzqn/pur_c5", O_RDWR|O_CREAT|O_EXCL|O_NOFOLLOW, 0600) = 3
fcntl(3, F_GETFD) = 0
fcntl(3, F_SETFD, FD_CLOEXEC) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c14468) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c14218) = -1 ENOTTY (Inappropriate ioctl for device)
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
close(3) = 0
open("/tmp/tmpicyzqn/vscch3", O_RDWR|O_CREAT|O_EXCL|O_NOFOLLOW, 0600) = 3
fcntl(3, F_GETFD) = 0
fcntl(3, F_SETFD, FD_CLOEXEC) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c14468) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=0, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c14218) = -1 ENOTTY (Inappropriate ioctl for device)
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
close(3) = 0
rt_sigaction(SIGINT, {SIG_IGN, [], SA_RESTORER, 0x7f6f35d55250}, {0x7f6f363dfe70, [], SA_RESTORER, 0x7f6f35d55250}, 8) = 0
rt_sigaction(SIGQUIT, {SIG_IGN, [], SA_RESTORER, 0x7f6f35d55250}, {SIG_DFL, [], SA_RESTORER, 0x7f6f35d55250}, 8) = 0
rt_sigprocmask(SIG_BLOCK, [CHLD], [], 8) = 0
clone(child_stack=0, flags=CLONE_PARENT_SETTID|SIGCHLD, parent_tidptr=0x7fff78c14d7c) = 24570
wait4(24570, build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `NA_checkFPErrors':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3019: undefined reference to `fetestexcept'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3026: undefined reference to `feclearexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `int_overflow_error':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:263: undefined reference to `feraiseexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_atanh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:233: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_asinh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `log'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:190: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_pow':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:207: undefined reference to `pow'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log10':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:198: undefined reference to `log10'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_round':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `ceil'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `floor'
collect2: ld returned 1 exit status
[{WIFEXITED(s) && WEXITSTATUS(s) == 0}], 0, NULL) = 24570
rt_sigaction(SIGINT, {0x7f6f363dfe70, [], SA_RESTORER, 0x7f6f35d55250}, NULL, 8) = 0
rt_sigaction(SIGQUIT, {SIG_DFL, [], SA_RESTORER, 0x7f6f35d55250}, NULL, 8) = 0
rt_sigprocmask(SIG_SETMASK, [], NULL, 8) = 0
--- {si_signo=SIGCHLD, si_code=CLD_EXITED, si_pid=24570, si_status=0, si_utime=0, si_stime=0} (Child exited) ---
open("/tmp/tmpicyzqn/vscch3", O_RDONLY) = 3
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c147e8) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
read(3, "1\n", 8192) = 2
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2
read(3, "", 8192) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2
read(3, "", 8192) = 0
close(3) = 0
unlink("/tmp/tmpicyzqn/vscch3") = 0
open("/tmp/tmpicyzqn/pur_c5", O_RDONLY) = 3
fstat(3, {st_mode=S_IFREG|0600, st_size=2091, ...}) = 0
ioctl(3, SNDCTL_TMR_TIMEBASE or SNDRV_TIMER_IOCTL_NEXT_DEVICE or
TCGETS, 0x7fff78c147e8) = -1 ENOTTY (Inappropriate ioctl for device)
fstat(3, {st_mode=S_IFREG|0600, st_size=2091, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
lseek(3, 0, SEEK_CUR) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2091, ...}) = 0
lseek(3, 0, SEEK_CUR) = 0
read(3, "build/temp.linux-x86_64-3.2/nump"..., 8192) = 2091
fstat(3, {st_mode=S_IFREG|0600, st_size=2091, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2091
read(3, "", 8192) = 0
fstat(3, {st_mode=S_IFREG|0600, st_size=2091, ...}) = 0
lseek(3, 0, SEEK_CUR) = 2091
read(3, "", 8192) = 0
close(3) = 0
unlink("/tmp/tmpicyzqn/pur_c5") = 0
write(1, "build/temp.linux-x86_64-3.2/nump"...,
2090build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function
`NA_checkFPErrors':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3019: undefined reference to `fetestexcept'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:3026: undefined reference to `feclearexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `int_overflow_error':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:263: undefined reference to `feraiseexcept'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_atanh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:233: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_asinh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `log'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:228: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `sqrt'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:190: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_acosh':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:213: undefined reference to `log'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_pow':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:207: undefined reference to `pow'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_log10':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:198: undefined reference to `log10'
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o: In function `num_round':
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `ceil'
/usr/local/src/numpy-1.7.1/build/py3k/numpy/numarray/_capi.c:239: undefined reference to `floor'
collect2: ld returned 1 exit status) = 2090
write(1, "\n", 1
) = 1
chdir("/usr/local/src/numpy-1.7.1") = 0
write(2, "error: Command \"gcc -pthread -sh"..., 333error: Command
"gcc -pthread -shared -Wl,--as-needed -Wl,--no-undefined -Wl,-z,relro
-Wl,-O1 -Wl,--build-id -Wl,--enable-new-dtags
build/temp.linux-x86_64-3.2/numpy/numarray/_capi.o -L/usr/lib64
-Lbuild/temp.linux-x86_64-3.2 -lpython3.2mu -o
build/lib.linux-x86_64-3.2/numpy/numarray/_capi.cpython-32mu.so" failed
with exit status 1
) = 333
lstat("/tmp/tmpicyzqn", {st_mode=S_IFDIR|0700, st_size=4096, ...}) = 0
open("/tmp/tmpicyzqn", O_RDONLY|O_NONBLOCK|O_DIRECTORY|O_CLOEXEC) = 3
getdents(3, /* 2 entries */, 32768) = 48
getdents(3, /* 0 entries */, 32768) = 0
close(3) = 0
rmdir("/tmp/tmpicyzqn") = 0
rt_sigaction(SIGINT, {SIG_DFL, [], SA_RESTORER, 0x7f6f360bc960}, {0x7f6f363dfe70, [], SA_RESTORER, 0x7f6f35d55250}, 8) = 0
exit_group(1)
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