[Numpy-discussion] bad CRC errors when using np.savez, only sometimes though!
Isaac Gerg
isaac.gerg at gergltd.com
Fri May 14 10:04:55 EDT 2021
I am using 1.19.5 on Windows 10 using Python 3.8.6 (tags/v3.8.6:db45529,
Sep 23 2020, 15:52:53) [MSC v.1927 64 bit (AMD64)].
I have two python processes running (i.e. no threads) which do
independent processing jobs and NOT writing to the same directories. Each
process runs for 5-10 hours and then writes out a ~900MB npz file
containing 4 arrays.
When I go back to read in the npz files, I will sporadically get bad CRC
errors which are related to npz using ziplib. I cannot figure out why this
is happening. Looking through online forums, other folks have had CRC
problems but they seem to be isolated to specifically using ziblib, not
numpy. I have found a few mentions though of ziplib causing headaches if
the same file pointer is used across calls when one uses the file handle
interface to ziblib as opposed to passing in a filename.'
I have verified with 7zip that the files do in fact have a CRC error so its
not an artifact of the ziblib. I have also used the file handle interface
to np.load and still get the error.
Aside from writing my own numpy storage file container, I am stumped as to
how to fix this, or reproduce this in a consistent manner. Any suggestions
would be greatly appreciated!
Thank you,
Isaac
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